Detailed information NTG0409405

Bioinformatically predicted

Overview

• Name: comD/comD3
• Type: Regulator
• Locus tag: GPZ88_RS03295
• Genome accession: NZ_CP046919
• Coordinates: 639568..640650 (-)
• Length: 360 a.a.
• NCBI ID: WP_240915107.1
• Uniprot ID: -
• Organism: Streptococcus ruminicola strain CNU_G2
• Function: phosphorylation of ComE (predicted from homology) Competence regulation

Genomic Context

Location: 634568..645650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPZ88_RS03270 (GPZ88_03245)	rpe	634940..635602 (-)	663	WP_006531895.1	ribulose-phosphate 3-epimerase	-
GPZ88_RS03275 (GPZ88_03250)	rsgA	635609..636481 (-)	873	WP_006531894.1	ribosome small subunit-dependent GTPase A	-
GPZ88_RS03285 (GPZ88_03260)	comE/comE2	636800..637534 (-)	735	WP_052071091.1	LytR/AlgR family response regulator transcription factor	Regulator
GPZ88_RS03290 (GPZ88_03265)	comD/comD3	638195..639571 (-)	1377	WP_240915106.1	sensor histidine kinase	Regulator
GPZ88_RS03295 (GPZ88_03270)	comD/comD3	639568..640650 (-)	1083	WP_240915107.1	sensor histidine kinase	Regulator
GPZ88_RS10350	comD/comD2	640943..641773 (-)	831	WP_240915108.1	sensor histidine kinase	Regulator
GPZ88_RS03305 (GPZ88_03280)	-	642677..642970 (-)	294	WP_074626913.1	bacteriocin immunity protein	-
GPZ88_RS03310 (GPZ88_03285)	-	642998..643303 (-)	306	WP_158914537.1	bacteriocin immunity protein	-
GPZ88_RS03315 (GPZ88_03290)	-	643316..643465 (-)	150	WP_039696228.1	hypothetical protein	-
GPZ88_RS03320 (GPZ88_03295)	comC/comC1	643728..643880 (+)	153	WP_158914538.1	hypothetical protein	Regulator
GPZ88_RS03325 (GPZ88_03300)	comD/comD1	643903..645228 (-)	1326	WP_166043386.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 41199.50 Da
• Isoelectric Point: 5.0117

>NTDB_id=409405 GPZ88_RS03295 WP_240915107.1 639568..640650(-) (comD/comD3) [Streptococcus ruminicola strain CNU_G2]
MILQGVYGYGILAIFSIKLNPLAMTSPSLGILIVMMTEVIIPPIFYYLVSKWLNIDISNVRKTLKNYLSARALRLVNVAL
LIFYPGMECFAALTPFEDMSTNRNIYRAVIFVYFIFLFIFLFYLNFRHGQEQKNELLRNQEMELAALENYSKHVESLYQE
VRSFRHDYANVLMSLKVGIDQGNLDDIKKIYDEITADSTKLVKNNKFDLTRLANITDSGVKSLMSAKFLQAENQGIAISL
EVSERMETPKIPLISYIRILSILFDNAIEAALESETPKISVANFYQDGDFVFMIENSSKEKSVDLGKIFERGYSTKGENR
GLGLATLMDFQDDYENLSVETHSSDYTFTQVVRIYEGDSR

Nucleotide

• Length: 1083 bp

>NTDB_id=409405 GPZ88_RS03295 WP_240915107.1 639568..640650(-) (comD/comD3) [Streptococcus ruminicola strain CNU_G2]
ATGATTTTACAGGGAGTTTATGGTTATGGCATATTAGCAATCTTTTCAATAAAATTAAATCCACTTGCAATGACTTCACC
ATCGTTAGGAATTCTGATTGTCATGATGACTGAGGTTATTATTCCACCAATTTTTTACTATTTAGTTTCAAAATGGTTGA
ACATTGATATTTCAAATGTTCGAAAAACGCTTAAAAATTACCTTAGTGCAAGAGCACTTAGGCTTGTTAATGTTGCTTTG
TTGATTTTTTATCCAGGAATGGAATGTTTTGCAGCACTAACGCCTTTTGAGGATATGTCAACGAATAGAAATATTTATAG
AGCAGTTATCTTCGTCTACTTTATTTTTCTCTTTATCTTCCTCTTTTACCTTAATTTCCGTCATGGGCAAGAGCAAAAAA
ATGAATTGCTTCGCAATCAGGAGATGGAATTGGCGGCCTTGGAAAATTATAGCAAGCACGTGGAAAGTTTATATCAAGAA
GTTCGCAGTTTTCGTCATGACTACGCTAATGTCTTAATGAGTTTGAAAGTTGGGATTGACCAAGGCAATCTGGATGACAT
CAAGAAAATTTACGACGAAATCACAGCCGATTCGACGAAACTAGTCAAGAATAATAAATTTGATTTGACTCGTCTGGCTA
ACATCACAGACAGTGGTGTTAAAAGTCTTATGTCAGCTAAATTCTTGCAGGCTGAAAATCAAGGGATTGCGATTAGTTTG
GAAGTTTCAGAAAGAATGGAAACTCCCAAAATTCCTTTGATTTCTTATATCCGCATCTTGTCAATCCTTTTCGACAATGC
TATTGAAGCAGCTTTGGAGTCTGAAACTCCCAAAATTTCCGTGGCTAATTTCTACCAAGATGGTGATTTTGTTTTCATGA
TTGAAAATTCAAGTAAGGAAAAATCAGTGGATTTAGGCAAGATTTTTGAGCGAGGTTACTCAACCAAGGGTGAAAATCGT
GGCCTTGGTCTGGCAACACTAATGGATTTCCAAGATGACTACGAAAATCTGTCGGTTGAAACTCACAGTTCAGATTACAC
ATTCACACAAGTGGTGAGAATATATGAGGGAGATAGTAGATGA

Domains

Predicted by InterproScan.

• GHKL domain (HATPase_c_5) (257-354)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comD/comD3	Streptococcus equinus JB1	88.235	99.167	0.875
comD/comD2	Streptococcus equinus JB1	81.587	87.5	0.714