Detailed information NTG0407122

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: SSU1300283_RS05760
• Genome accession: NZ_CP058741
• Coordinates: 1185445..1186116 (-)
• Length: 223 a.a.
• NCBI ID: WP_009909965.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 13-00283-02
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1180445..1191116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU1300283_RS05740 (SSU1300283_01162)	coaA	1181031..1181951 (+)	921	WP_002935283.1	type I pantothenate kinase	-
SSU1300283_RS05745 (SSU1300283_01163)	rpsT	1182010..1182258 (+)	249	WP_012027069.1	30S ribosomal protein S20	-
SSU1300283_RS05750 (SSU1300283_01164)	-	1182520..1183749 (-)	1230	WP_002935288.1	transglutaminase domain-containing protein	-
SSU1300283_RS05755 (SSU1300283_01165)	ciaH	1184073..1185452 (-)	1380	WP_002935290.1	cell wall metabolism sensor histidine kinase WalK	Regulator
SSU1300283_RS05760 (SSU1300283_01166)	ciaR	1185445..1186116 (-)	672	WP_009909965.1	response regulator transcription factor	Regulator
SSU1300283_RS05765 (SSU1300283_01167)	-	1186310..1186690 (-)	381	WP_002935294.1	hypothetical protein	-
SSU1300283_RS05770 (SSU1300283_01168)	-	1187075..1188277 (+)	1203	WP_318630705.1	IS110-like element ISSsu7 family transposase	-
SSU1300283_RS05775 (SSU1300283_01169)	phoU	1188478..1189134 (-)	657	WP_002937611.1	phosphate signaling complex protein PhoU	-
SSU1300283_RS05780 (SSU1300283_01170)	pstB	1189163..1189921 (-)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
SSU1300283_RS05785 (SSU1300283_01171)	pstB	1189933..1190736 (-)	804	WP_002937615.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25290.00 Da
• Isoelectric Point: 4.2183

>NTDB_id=407122 SSU1300283_RS05760 WP_009909965.1 1185445..1186116(-) (ciaR) [Streptococcus suis strain 13-00283-02]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTFGDVTVDLSTNMTMVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=407122 SSU1300283_RS05760 WP_009909965.1 1185445..1186116(-) (ciaR) [Streptococcus suis strain 13-00283-02]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGTCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTGATGT
TGCCTGAAAAAGATGGCTTCCAAGTCTTGAAAGAATTACGTGAAAAAGGTGTTACGACACCTGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGGGCTGATGACTATTTGACAAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACCTTTGGAGATGTGACAG
TTGACCTATCTACAAATATGACGATGGTAAATGGCGAAGAAGTTGAACTGCTAGGAAAAGAATTTGATCTACTAGTTTAT
TTCTTGCAAAATCAAAATGTTATTTTGCCAAAAACACAAATTTTTGACCGTATTTGGGGCTTTGACAGTGATACTACAAT
TTCAGTAGTAGAAGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACCTTTGGGGAAAATCTTCAAACCCTGC
GTAGTGTTGGATACATTCTAAAAAATGCCTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.341	100	0.883
ciaR	Streptococcus pneumoniae D39	88.341	100	0.883
ciaR	Streptococcus pneumoniae R6	88.341	100	0.883
ciaR	Streptococcus pneumoniae TIGR4	88.341	100	0.883
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.496	100	0.39
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	35.841	100	0.363