Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GO999_RS13835 | Genome accession | NZ_CP046674 |
| Coordinates | 3014684..3015205 (-) | Length | 173 a.a. |
| NCBI ID | WP_011000516.1 | Uniprot ID | Q8Y1Y0 |
| Organism | Ralstonia nicotianae strain RS | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3009684..3020205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO999_RS13820 (GO999_13820) | moaC | 3011373..3011849 (+) | 477 | WP_071011469.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| GO999_RS13825 (GO999_13825) | - | 3012077..3013810 (-) | 1734 | WP_111374452.1 | PglL family O-oligosaccharyltransferase | - |
| GO999_RS13830 (GO999_13830) | pilA | 3013908..3014417 (-) | 510 | WP_111374451.1 | pilin | Machinery gene |
| GO999_RS13835 (GO999_13835) | pilA | 3014684..3015205 (-) | 522 | WP_011000516.1 | pilin | Machinery gene |
| GO999_RS13840 (GO999_13840) | - | 3015399..3016097 (-) | 699 | WP_019717569.1 | TerC family protein | - |
| GO999_RS13845 (GO999_13845) | sucD | 3016247..3017128 (-) | 882 | WP_011000514.1 | succinate--CoA ligase subunit alpha | - |
| GO999_RS13850 (GO999_13850) | sucC | 3017213..3018379 (-) | 1167 | WP_011000513.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| GO999_RS13855 (GO999_13855) | - | 3018446..3019072 (-) | 627 | WP_197360772.1 | DUF2889 domain-containing protein | - |
| GO999_RS13860 (GO999_13860) | recX | 3019347..3019826 (-) | 480 | WP_211906319.1 | recombination regulator RecX | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 17844.54 Da Isoelectric Point: 10.0311
>NTDB_id=406658 GO999_RS13835 WP_011000516.1 3014684..3015205(-) (pilA) [Ralstonia nicotianae strain RS]
MASKHSRNRRRGQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVVEGLALAGQAKALVVENAANAQSSLSLGSASL
PASKNVSALNIDSSTGEIAVVYAPAVTEAGANTLVLTPYSGSSSVFGNLQAGSTPPAMVLWVCAAAGKSMPVNTVTQRTT
ATLPPKYAPSECR
MASKHSRNRRRGQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVVEGLALAGQAKALVVENAANAQSSLSLGSASL
PASKNVSALNIDSSTGEIAVVYAPAVTEAGANTLVLTPYSGSSSVFGNLQAGSTPPAMVLWVCAAAGKSMPVNTVTQRTT
ATLPPKYAPSECR
Nucleotide
Download Length: 522 bp
>NTDB_id=406658 GO999_RS13835 WP_011000516.1 3014684..3015205(-) (pilA) [Ralstonia nicotianae strain RS]
ATGGCATCGAAGCACAGCAGGAACAGGCGGCGTGGCCAGCGCGGCTTTACATTGATCGAGTTGATGATCGTGGTGGCGAT
CATCGGGATTTTGGCGGCGCTGGCGATTCCGGCGTATCAGGACTACACGATCCGGTCGCGTGTGGTCGAGGGGCTGGCAC
TGGCAGGGCAAGCCAAGGCGCTGGTGGTTGAAAATGCCGCCAACGCACAGAGTAGCCTGTCACTCGGTTCCGCATCGTTG
CCGGCCAGCAAGAACGTCAGTGCGCTGAATATTGATTCGTCCACCGGCGAAATCGCAGTGGTCTATGCACCCGCTGTTAC
GGAAGCGGGGGCGAATACGTTGGTATTGACCCCATACTCCGGCAGTTCGTCAGTATTTGGCAATTTGCAGGCAGGTTCAA
CGCCGCCGGCAATGGTGCTGTGGGTGTGTGCCGCCGCCGGCAAGTCGATGCCGGTCAATACCGTTACCCAGAGGACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGCCGTTGA
ATGGCATCGAAGCACAGCAGGAACAGGCGGCGTGGCCAGCGCGGCTTTACATTGATCGAGTTGATGATCGTGGTGGCGAT
CATCGGGATTTTGGCGGCGCTGGCGATTCCGGCGTATCAGGACTACACGATCCGGTCGCGTGTGGTCGAGGGGCTGGCAC
TGGCAGGGCAAGCCAAGGCGCTGGTGGTTGAAAATGCCGCCAACGCACAGAGTAGCCTGTCACTCGGTTCCGCATCGTTG
CCGGCCAGCAAGAACGTCAGTGCGCTGAATATTGATTCGTCCACCGGCGAAATCGCAGTGGTCTATGCACCCGCTGTTAC
GGAAGCGGGGGCGAATACGTTGGTATTGACCCCATACTCCGGCAGTTCGTCAGTATTTGGCAATTTGCAGGCAGGTTCAA
CGCCGCCGGCAATGGTGCTGTGGGTGTGTGCCGCCGCCGGCAAGTCGATGCCGGTCAATACCGTTACCCAGAGGACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGCCGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
51.705 |
100 |
0.526 |
| pilA2 | Legionella pneumophila str. Paris |
44.848 |
95.376 |
0.428 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.242 |
95.376 |
0.422 |
| comP | Acinetobacter baylyi ADP1 |
39.773 |
100 |
0.405 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.938 |
100 |
0.399 |