Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GO593_RS04700 | Genome accession | NZ_CP046654 |
| Coordinates | 987682..988110 (-) | Length | 142 a.a. |
| NCBI ID | WP_000993713.1 | Uniprot ID | A0A6F8TC45 |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 982682..993110
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO593_RS04675 (GO593_04675) | - | 983042..983425 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| GO593_RS04680 (GO593_04680) | - | 983635..983829 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| GO593_RS04685 (GO593_04685) | bfr | 984074..984538 (+) | 465 | WP_000678117.1 | bacterioferritin | - |
| GO593_RS04690 (GO593_04690) | - | 984581..986209 (-) | 1629 | WP_001195770.1 | PglL family O-oligosaccharyltransferase | - |
| GO593_RS04695 (GO593_04695) | - | 986316..987626 (-) | 1311 | WP_000913740.1 | O-antigen ligase family protein | - |
| GO593_RS04700 (GO593_04700) | pilA | 987682..988110 (-) | 429 | WP_000993713.1 | pilin | Machinery gene |
| GO593_RS04705 (GO593_04705) | - | 988453..989013 (-) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| GO593_RS04710 (GO593_04710) | - | 989007..990089 (-) | 1083 | WP_001246543.1 | TPM domain-containing protein | - |
| GO593_RS04715 (GO593_04715) | - | 990114..990704 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| GO593_RS04720 (GO593_04720) | - | 990835..991722 (-) | 888 | WP_001017317.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14515.55 Da Isoelectric Point: 6.1941
>NTDB_id=406472 GO593_RS04700 WP_000993713.1 987682..988110(-) (pilA) [Acinetobacter baumannii strain ATCC 19606]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
Nucleotide
Download Length: 429 bp
>NTDB_id=406472 GO593_RS04700 WP_000993713.1 987682..988110(-) (pilA) [Acinetobacter baumannii strain ATCC 19606]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
92.254 |
100 |
0.923 |
| pilA | Acinetobacter baumannii strain A118 |
44.828 |
100 |
0.458 |
| pilA | Pseudomonas aeruginosa PAK |
41.497 |
100 |
0.43 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae strain A1552 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae C6706 |
40.411 |
100 |
0.415 |