Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GPA00_RS05965 | Genome accession | NZ_CP046629 |
| Coordinates | 1178138..1178818 (+) | Length | 226 a.a. |
| NCBI ID | WP_157327855.1 | Uniprot ID | - |
| Organism | Streptococcus equinus strain CNU G6 | ||
| Function | dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1173138..1183818
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPA00_RS05935 (GPA00_05935) | - | 1173155..1174354 (+) | 1200 | WP_157327849.1 | MFS transporter | - |
| GPA00_RS05940 (GPA00_05940) | - | 1174386..1175252 (+) | 867 | WP_157327851.1 | helix-turn-helix transcriptional regulator | - |
| GPA00_RS05945 (GPA00_05945) | - | 1175262..1176152 (+) | 891 | WP_157327853.1 | ROK family protein | - |
| GPA00_RS05950 (GPA00_05950) | - | 1176167..1176442 (-) | 276 | WP_024344272.1 | GIY-YIG nuclease family protein | - |
| GPA00_RS05955 (GPA00_05955) | - | 1176417..1177178 (-) | 762 | WP_074450932.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GPA00_RS05960 (GPA00_05960) | - | 1177297..1178043 (+) | 747 | WP_024344274.1 | lysophospholipid acyltransferase family protein | - |
| GPA00_RS05965 (GPA00_05965) | comEA | 1178138..1178818 (+) | 681 | WP_157327855.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GPA00_RS05970 (GPA00_05970) | comEC/celB | 1178811..1181042 (+) | 2232 | WP_157327857.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| GPA00_RS05975 (GPA00_05975) | holA | 1181110..1182147 (+) | 1038 | WP_074479778.1 | DNA polymerase III subunit delta | - |
| GPA00_RS05980 (GPA00_05980) | sodA | 1182243..1182854 (+) | 612 | WP_039698404.1 | superoxide dismutase SodA | - |
| GPA00_RS05985 (GPA00_05985) | - | 1182960..1183685 (+) | 726 | WP_024344280.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Sequence
Protein
Download Length: 226 a.a. Molecular weight: 24160.05 Da Isoelectric Point: 4.5485
>NTDB_id=406312 GPA00_RS05965 WP_157327855.1 1178138..1178818(+) (comEA) [Streptococcus equinus strain CNU G6]
MIEEMKEKILEHKTVASVLGTVLVMLVIFFAWSSMESHKAEVQNDLPALSTNFSTSRAETSQPKTVTSASKTESDKIFVD
IKGAVRKEGVYELTSGSRVTDVVKLAGGFTDDADKKSVNLAEKVADEAVIYVARVGEEVTPASTPSQAKNTAASGAQQDA
DSAQINLNTATLEELQTISGIGAKRAQDIIDYRDNNGGFSSVDDLKNVSGIGEKTLEKLKAEVTVD
MIEEMKEKILEHKTVASVLGTVLVMLVIFFAWSSMESHKAEVQNDLPALSTNFSTSRAETSQPKTVTSASKTESDKIFVD
IKGAVRKEGVYELTSGSRVTDVVKLAGGFTDDADKKSVNLAEKVADEAVIYVARVGEEVTPASTPSQAKNTAASGAQQDA
DSAQINLNTATLEELQTISGIGAKRAQDIIDYRDNNGGFSSVDDLKNVSGIGEKTLEKLKAEVTVD
Nucleotide
Download Length: 681 bp
>NTDB_id=406312 GPA00_RS05965 WP_157327855.1 1178138..1178818(+) (comEA) [Streptococcus equinus strain CNU G6]
ATGATTGAAGAGATGAAAGAAAAAATTTTAGAGCATAAAACTGTGGCATCAGTTTTGGGGACAGTACTTGTTATGCTAGT
GATATTTTTTGCTTGGTCTAGTATGGAAAGCCACAAAGCTGAAGTGCAAAATGATTTACCAGCATTGAGCACTAACTTTT
CAACAAGTAGGGCAGAAACATCTCAGCCAAAAACAGTAACATCTGCTTCAAAAACTGAATCAGATAAAATTTTCGTTGAT
ATTAAAGGTGCCGTCAGAAAAGAAGGTGTTTATGAATTAACATCAGGTAGTCGTGTGACAGATGTGGTCAAATTAGCTGG
CGGTTTTACAGATGATGCGGATAAGAAATCTGTTAATTTAGCTGAAAAAGTAGCGGACGAAGCAGTGATTTACGTGGCAA
GAGTTGGTGAAGAGGTCACACCAGCAAGTACCCCGTCTCAAGCTAAAAATACAGCAGCAAGTGGAGCGCAGCAAGATGCG
GACTCAGCACAAATCAATCTTAATACTGCGACTTTAGAAGAACTTCAGACGATTTCTGGCATCGGCGCCAAACGTGCTCA
AGACATCATCGATTATCGTGATAACAACGGTGGATTTTCGTCAGTTGATGATTTGAAAAATGTGTCAGGTATTGGTGAGA
AGACCTTAGAAAAACTAAAAGCTGAGGTGACAGTTGATTAA
ATGATTGAAGAGATGAAAGAAAAAATTTTAGAGCATAAAACTGTGGCATCAGTTTTGGGGACAGTACTTGTTATGCTAGT
GATATTTTTTGCTTGGTCTAGTATGGAAAGCCACAAAGCTGAAGTGCAAAATGATTTACCAGCATTGAGCACTAACTTTT
CAACAAGTAGGGCAGAAACATCTCAGCCAAAAACAGTAACATCTGCTTCAAAAACTGAATCAGATAAAATTTTCGTTGAT
ATTAAAGGTGCCGTCAGAAAAGAAGGTGTTTATGAATTAACATCAGGTAGTCGTGTGACAGATGTGGTCAAATTAGCTGG
CGGTTTTACAGATGATGCGGATAAGAAATCTGTTAATTTAGCTGAAAAAGTAGCGGACGAAGCAGTGATTTACGTGGCAA
GAGTTGGTGAAGAGGTCACACCAGCAAGTACCCCGTCTCAAGCTAAAAATACAGCAGCAAGTGGAGCGCAGCAAGATGCG
GACTCAGCACAAATCAATCTTAATACTGCGACTTTAGAAGAACTTCAGACGATTTCTGGCATCGGCGCCAAACGTGCTCA
AGACATCATCGATTATCGTGATAACAACGGTGGATTTTCGTCAGTTGATGATTTGAAAAATGTGTCAGGTATTGGTGAGA
AGACCTTAGAAAAACTAAAAGCTGAGGTGACAGTTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Streptococcus thermophilus LMD-9 |
46.581 |
100 |
0.482 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
44.889 |
99.558 |
0.447 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
44.889 |
99.558 |
0.447 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
44.493 |
100 |
0.447 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
42.291 |
100 |
0.425 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
42.291 |
100 |
0.425 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
42.291 |
100 |
0.425 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
39.462 |
98.673 |
0.389 |