Detailed information NTG0406241

Bioinformatically predicted

Overview

• Name: comD/comD3
• Type: Regulator
• Locus tag: GO596_RS04005
• Genome accession: NZ_CP046628
• Coordinates: 796840..797853 (+)
• Length: 337 a.a.
• NCBI ID: WP_232516875.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain CNU 77-23
• Function: phosphorylation of ComE (predicted from homology) Competence regulation

Genomic Context

Location: 791840..802853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO596_RS09440	comC/comC1	792286..792432 (-)	147	WP_169741101.1	hypothetical protein	Regulator
GO596_RS03980 (GO596_03980)	-	792620..792916 (+)	297	WP_157339240.1	DUF3884 family protein	-
GO596_RS03985 (GO596_03985)	-	792936..793241 (+)	306	WP_024344359.1	bacteriocin immunity protein	-
GO596_RS03990 (GO596_03990)	-	793273..793566 (+)	294	WP_157339241.1	bacteriocin immunity protein	-
GO596_RS03995 (GO596_03995)	comD/comD3	793914..795104 (+)	1191	WP_232516874.1	sensor histidine kinase	Regulator
GO596_RS04000 (GO596_04000)	comD/comD3	795094..796467 (+)	1374	WP_157339242.1	GHKL domain-containing protein	Regulator
GO596_RS04005 (GO596_04005)	comD/comD3	796840..797853 (+)	1014	WP_232516875.1	sensor histidine kinase	Regulator
GO596_RS04010 (GO596_04010)	comD/comD3	797850..799241 (+)	1392	WP_157339244.1	GHKL domain-containing protein	Regulator
GO596_RS04015 (GO596_04015)	comE/comE2	799862..800590 (+)	729	WP_074628324.1	LytR/AlgR family response regulator transcription factor	Regulator
GO596_RS04025 (GO596_04025)	rsgA	800882..801754 (+)	873	WP_157339245.1	ribosome small subunit-dependent GTPase A	-
GO596_RS04030 (GO596_04030)	rpe	801761..802423 (+)	663	WP_157339246.1	ribulose-phosphate 3-epimerase	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 38855.87 Da
• Isoelectric Point: 5.7676

>NTDB_id=406241 GO596_RS04005 WP_232516875.1 796840..797853(+) (comD/comD3) [Streptococcus equinus strain CNU 77-23]
MTSPSLEIIIGTITMVIIPPIFYHLMSKWLNIDISNVRKTLKHYLSAKALRFVNVLLLLFYPGIECFAAIAPFENMSTNK
NIYRLTILVYFILLFAFLFYLNFRHGQEQKNELLRNQEMELKALENYSKHVESLYQEVRSFRHDYANVLMSLKVGIDQGD
LDNIKKIYEEITADSAKLVKNNKFDLTRLANISDSAVKSLMSAKFLEAENRGIEISLEVAEPMKNPKIPLISYIRILSIL
FDNAIEAALESENPKIAVANFYQDGDFVFIIENSTKEKSVDLTKIFERGYSTKGDNRGIGLVTLMDFQDDYENLSVETRS
LDYKFTQVVRVYEGENR

Nucleotide

• Length: 1014 bp

>NTDB_id=406241 GO596_RS04005 WP_232516875.1 796840..797853(+) (comD/comD3) [Streptococcus equinus strain CNU 77-23]
ATGACTTCACCATCGTTAGAAATTATAATTGGTACAATAACTATGGTTATTATTCCACCAATTTTTTATCACTTGATGTC
CAAATGGTTAAATATTGATATTTCAAATGTTCGAAAAACATTAAAGCATTATCTTAGTGCAAAAGCGCTTAGATTCGTCA
ATGTTTTATTATTACTTTTTTATCCAGGAATAGAGTGTTTTGCGGCGATAGCACCGTTTGAAAATATGTCAACGAATAAA
AATATTTATAGGTTGACTATCCTTGTTTACTTCATTCTTCTATTTGCCTTCCTTTTCTATCTTAATTTCCGTCATGGGCA
GGAGCAGAAAAATGAGCTGCTCCGCAATCAGGAAATGGAGCTTAAAGCTTTGGAAAATTATAGTAAACATGTGGAGAGTT
TGTACCAAGAAGTGCGCAGTTTTCGTCACGATTATGCCAACGTTTTGATGAGTTTGAAGGTCGGCATTGATCAAGGTGAT
CTTGATAATATCAAGAAAATTTACGAAGAAATCACGGCTGACTCAGCGAAGTTGGTCAAAAACAATAAGTTTGATTTGAC
GCGACTAGCAAATATTTCAGACAGTGCCGTCAAAAGTCTCATGTCGGCTAAATTTTTGGAGGCTGAAAATCGAGGTATTG
AAATTAGTCTAGAAGTGGCAGAGCCGATGAAAAATCCCAAAATCCCACTGATTTCTTACATTCGAATTTTATCAATTCTG
TTTGACAATGCCATCGAGGCTGCCTTAGAGTCGGAAAATCCCAAAATCGCAGTAGCGAATTTTTATCAAGACGGAGATTT
TGTGTTTATCATTGAAAATTCAACTAAGGAAAAATCAGTGGATTTAACTAAGATTTTTGAGCGTGGCTATTCAACCAAGG
GAGACAATCGCGGAATTGGTCTAGTCACACTAATGGATTTCCAAGATGATTACGAAAATCTGTCAGTTGAAACCCGCAGT
CTTGATTACAAATTTACGCAAGTTGTGAGAGTTTATGAGGGGGAGAATAGATGA

Domains

Predicted by InterproScan.

• GHKL domain (HATPase_c_5) (234-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comD/comD3	Streptococcus equinus JB1	86.228	99.11	0.855
comD/comD2	Streptococcus equinus JB1	74.286	93.472	0.694