Detailed information NTG0405260

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GOD87_RS16120
• Genome accession: NZ_CP046536
• Coordinates: 3438294..3439352 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain XL380
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3433294..3444352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOD87_RS16095 (GOD87_16095)	aroK	3433564..3434133 (-)	570	WP_000643712.1	shikimate kinase AroK	-
GOD87_RS16100 (GOD87_16100)	pilQ	3434145..3436310 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
GOD87_RS16105 (GOD87_16105)	pilP	3436378..3436905 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
GOD87_RS16110 (GOD87_16110)	pilO	3436916..3437656 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
GOD87_RS16115 (GOD87_16115)	pilN	3437653..3438294 (-)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
GOD87_RS16120 (GOD87_16120)	pilM	3438294..3439352 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
GOD87_RS16125 (GOD87_16125)	ponA	3439514..3442069 (+)	2556	WP_057094660.1	penicillin-binding protein PBP1a	-
GOD87_RS16130 (GOD87_16130)	-	3442087..3442911 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
GOD87_RS16135 (GOD87_16135)	-	3442914..3443246 (-)	333	WP_057094662.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=405260 GOD87_RS16120 WP_002014066.1 3438294..3439352(-) (pilM) [Acinetobacter baumannii strain XL380]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=405260 GOD87_RS16120 WP_002014066.1 3438294..3439352(-) (pilM) [Acinetobacter baumannii strain XL380]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423