Detailed information NTG0405070

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: GOM46_RS04765
• Genome accession: NZ_CP046525
• Coordinates: 962095..962952 (-)
• Length: 285 a.a.
• NCBI ID: WP_414930185.1
• Uniprot ID: -
• Organism: Streptococcus infantis strain SO
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 957095..967952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM46_RS04745 (GOM46_04735)	-	957993..958649 (-)	657	WP_006151130.1	MmcQ/YjbR family DNA-binding protein	-
GOM46_RS04750 (GOM46_04740)	-	958693..959325 (-)	633	WP_006151147.1	copper homeostasis protein CutC	-
GOM46_RS04755 (GOM46_04745)	-	959419..959778 (-)	360	WP_006151143.1	YbaN family protein	-
GOM46_RS04760 (GOM46_04750)	topA	959887..961974 (-)	2088	WP_235083294.1	type I DNA topoisomerase	-
GOM46_RS04765 (GOM46_04755)	dprA/cilB/dalA	962095..962952 (-)	858	WP_414930185.1	DNA-processing protein DprA	Machinery gene
GOM46_RS04770 (GOM46_04760)	dapA	963059..963994 (-)	936	WP_006150491.1	4-hydroxy-tetrahydrodipicolinate synthase	-
GOM46_RS04775 (GOM46_04765)	-	964046..965122 (-)	1077	WP_006150470.1	aspartate-semialdehyde dehydrogenase	-
GOM46_RS04780 (GOM46_04770)	-	965409..966158 (-)	750	WP_006150485.1	class A sortase	-

Sequence

Protein

• Length: 285 a.a.
• Molecular weight: 31830.58 Da
• Isoelectric Point: 5.2518

>NTDB_id=405070 GOM46_RS04765 WP_414930185.1 962095..962952(-) (dprA/cilB/dalA) [Streptococcus infantis strain SO]
MKIDNFEIYKLKQAGLSNQQVLKVLQYGEIYDQELSLETIAEASECRNPVVFMERYHKLTFESMERLQKDFEKFPSFSIL
DDVYPISLSEIYDAPVLLFYKGDLNLLKLPKIAVVGSRSCSQTGTKSVRKVIEELENELVVVSGLARGIDTAAHMSILQT
GGKTIAVIGTGLDVYYPRSNKRLQEYIGDNHLILSEYGPGEEPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERA
MEEGRDVFAIPGSILDGRSDGCHHLIQEGAKLATCGQDILAEFEF

Nucleotide

• Length: 858 bp

>NTDB_id=405070 GOM46_RS04765 WP_414930185.1 962095..962952(-) (dprA/cilB/dalA) [Streptococcus infantis strain SO]
ATTAAGATTGATAATTTCGAGATTTATAAGTTAAAGCAAGCAGGTTTAAGTAATCAGCAGGTTCTGAAAGTTCTTCAATA
TGGAGAAATTTATGATCAGGAATTGAGTTTAGAGACAATTGCTGAAGCCTCAGAGTGTCGTAATCCAGTAGTTTTTATGG
AGCGATATCATAAACTGACTTTTGAAAGCATGGAACGTCTCCAGAAAGATTTTGAAAAGTTCCCATCATTTTCAATTTTG
GATGATGTTTATCCAATTTCACTCAGTGAAATTTATGATGCACCTGTATTGCTTTTTTATAAAGGAGATTTAAATCTCTT
GAAATTACCCAAGATAGCAGTTGTAGGTAGTCGCTCTTGTAGTCAAACCGGAACCAAATCAGTCCGGAAAGTCATTGAAG
AACTGGAGAATGAATTAGTTGTGGTGAGCGGACTTGCTAGAGGAATCGACACAGCAGCCCATATGTCAATTCTTCAAACT
GGTGGCAAAACGATTGCAGTGATCGGGACTGGTTTAGACGTCTATTATCCTCGTTCAAATAAACGTCTTCAAGAATACAT
TGGAGACAATCATTTAATACTAAGTGAGTACGGACCAGGGGAAGAACCCTTGAAATTTCACTTTCCTGCCAGAAATCGCA
TTATTGCAGGATTGTGTAGAGGAGTTATCGTTGCAGAAGCTAAAATGAGATCTGGTAGCTTAATCACTTGTGAGCGTGCG
ATGGAGGAAGGTAGAGATGTCTTTGCGATTCCAGGTTCCATTTTAGATGGACGCTCAGACGGCTGTCATCATTTGATCCA
AGAAGGAGCAAAACTAGCAACATGTGGGCAGGATATACTAGCAGAATTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (78-274)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	79.298	100	0.793
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae D39	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae R6	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	78.947	100	0.789
dprA/cilB/dalA	Streptococcus mitis SK321	78.246	100	0.782
dprA	Streptococcus mutans UA159	61.131	99.298	0.607
dprA	Lactococcus lactis subsp. cremoris KW2	55.124	99.298	0.547