Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   GE024_RS10750 Genome accession   NZ_CP046521
Coordinates   2175918..2177141 (+) Length   407 a.a.
NCBI ID   WP_093999374.1    Uniprot ID   A0A3P5XRA7
Organism   Streptococcus canis strain HL_100     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2170918..2182141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE024_RS10720 (GE024_10800) recF 2171362..2172465 (-) 1104 WP_093999512.1 DNA replication/repair protein RecF -
  GE024_RS10725 (GE024_10805) yaaA 2172467..2172880 (-) 414 WP_093999511.1 S4 domain-containing protein YaaA -
  GE024_RS10730 (GE024_10810) - 2172960..2173859 (-) 900 Protein_2068 IS30 family transposase -
  GE024_RS10735 (GE024_10815) - 2174082..2174906 (-) 825 Protein_2069 DDE-type integrase/transposase/recombinase -
  GE024_RS10745 (GE024_10825) rlmH 2175226..2175705 (-) 480 WP_093999375.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE024_RS10750 (GE024_10830) htrA 2175918..2177141 (+) 1224 WP_093999374.1 S1C family serine protease Regulator
  GE024_RS10755 (GE024_10835) spo0J 2177238..2178005 (+) 768 WP_093999373.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42616.03 Da        Isoelectric Point: 5.7603

>NTDB_id=404880 GE024_RS10750 WP_093999374.1 2175918..2177141(+) (htrA) [Streptococcus canis strain HL_100]
MPTMKHILKFLGITLIGFLGGILAIVTVNNTSQQSSSTSHSGSATTSKMVFNNTTDTTKAVNVIQNAVVSVINYQDDPSS
SLSNPYIKLFGEDQAKENKDAELTIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTIAEFADSSKLNVGEVAIAIGSPLGTQYANSVTEGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGNNGNSGAVEGIGFAIPSSDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALRQ
INIPTSVTGGIVVASVQAGMPATGKLTQYDVITEIDGKAVNSISDLQSNLYGHNINDTIKVTFYRGTAKKKADIKLTKTT
QDLSKAQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=404880 GE024_RS10750 WP_093999374.1 2175918..2177141(+) (htrA) [Streptococcus canis strain HL_100]
ATGCCCACTATGAAACATATCTTAAAATTCTTAGGTATTACACTCATCGGATTTTTAGGAGGAATCTTGGCTATTGTTAC
AGTTAATAATACTAGTCAACAATCTTCTTCTACGTCACACTCAGGTAGTGCAACAACCAGTAAAATGGTTTTCAATAATA
CCACTGATACTACAAAAGCTGTTAACGTTATTCAAAATGCAGTGGTATCCGTTATTAATTATCAAGATGATCCTTCTTCA
TCTTTGTCTAATCCTTACATAAAACTTTTTGGAGAGGATCAGGCAAAAGAAAATAAGGATGCTGAACTAACAATTTTTAG
CGAAGGTTCTGGTGTCATTTATCGAAAAGACGGTAATTCTGCCTATGTTGTTACTAATAATCACGTTATTGATGGTGCTA
AGCGCATTGAAATCCTTATGGCTGATGGATCTAAAGTGGTTGGGGAATTAGTCGGCGCTGATACCTATTCTGACTTAGCA
GTTGTCAAAATTTCTTCTGATAAGATTAAAACAATCGCGGAATTTGCTGATTCAAGCAAACTTAATGTTGGAGAAGTAGC
TATTGCTATAGGTAGTCCTTTAGGAACTCAATATGCCAATTCTGTCACCGAAGGGATTGTTTCAAGTCTCAGTCGTACTG
TTACCTTAAAAAATGAAAATGGTGAAACTGTTTCAACCAATGCTATTCAAACAGACGCTGCCATTAATCCAGGAAACTCT
GGTGGTCCACTCATTAATATCGAAGGACAAGTCATCGGAATTAATTCAAGTAAAATTTCCTCTACACCAACTGGTAATAA
TGGTAATAGCGGAGCTGTCGAAGGAATCGGCTTTGCTATTCCATCTAGTGATGTTATCAAAATTATCAAGCAATTAGAAA
CCAATGGAGAAGTCATCAGACCTGCCCTTGGTATCTCTATGGTTAACTTAAATGATTTATCAACCAATGCCCTTCGTCAA
ATCAATATTCCAACTAGTGTGACAGGTGGGATTGTAGTCGCTTCTGTTCAAGCTGGCATGCCAGCTACAGGTAAACTTAC
TCAGTACGATGTGATTACCGAAATCGATGGTAAAGCCGTCAACTCAATTAGTGATCTTCAAAGTAATTTATATGGACATA
ACATTAATGATACTATCAAAGTAACCTTTTACAGAGGGACAGCAAAGAAAAAAGCAGACATCAAATTAACGAAGACTACA
CAAGATTTAAGTAAAGCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3P5XRA7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.794

99.017

0.602

  htrA Streptococcus mitis NCTC 12261

54.3

100

0.543

  htrA Streptococcus pneumoniae Rx1

54.3

100

0.543

  htrA Streptococcus pneumoniae D39

54.3

100

0.543

  htrA Streptococcus pneumoniae R6

54.3

100

0.543

  htrA Streptococcus pneumoniae TIGR4

54.3

100

0.543

  htrA Streptococcus gordonii str. Challis substr. CH1

54.975

98.771

0.543


Multiple sequence alignment