Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GE024_RS10755 Genome accession   NZ_CP046521
Coordinates   2177238..2178005 (+) Length   255 a.a.
NCBI ID   WP_093999373.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_100     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2172238..2183005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE024_RS10725 (GE024_10805) yaaA 2172467..2172880 (-) 414 WP_093999511.1 S4 domain-containing protein YaaA -
  GE024_RS10730 (GE024_10810) - 2172960..2173859 (-) 900 Protein_2068 IS30 family transposase -
  GE024_RS10735 (GE024_10815) - 2174082..2174906 (-) 825 Protein_2069 DDE-type integrase/transposase/recombinase -
  GE024_RS10745 (GE024_10825) rlmH 2175226..2175705 (-) 480 WP_093999375.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE024_RS10750 (GE024_10830) htrA 2175918..2177141 (+) 1224 WP_093999374.1 S1C family serine protease Regulator
  GE024_RS10755 (GE024_10835) spo0J 2177238..2178005 (+) 768 WP_093999373.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 28708.41 Da        Isoelectric Point: 10.0683

>NTDB_id=404881 GE024_RS10755 WP_093999373.1 2177238..2178005(+) (spo0J) [Streptococcus canis strain HL_100]
MTELLIQIPIEDIVANPYQPRLQFNQKELEDLARSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKIAGLTKVPAIVK
TISALESMQQAIVENLQRADLNAIEEAKAYQLLIDKNKMTHEEVAKYMGKSRPYISNTLRLLQLPDSIQRAVENGDISAG
HARALLAFSNEKEQLLYATKIKNEGMSVRQIEQLVTPKPKKSKKDKDIFVTSLEKQLAKSLGLKATIKLTSHQTGHLQLP
FANEDELNRIINKLL

Nucleotide


Download         Length: 768 bp        

>NTDB_id=404881 GE024_RS10755 WP_093999373.1 2177238..2178005(+) (spo0J) [Streptococcus canis strain HL_100]
ATGACAGAATTATTGATACAAATTCCCATTGAAGATATTGTGGCAAATCCCTATCAGCCAAGACTTCAATTTAATCAAAA
AGAGCTTGAAGACTTAGCAAGGTCAATCAAAGCAAATGGACTTATTCAACCTATTATCGTTCGAAAATCTGATATTTTTG
GTTATGAACTAGTCGCTGGAGAACGACGATTTAAAGCTTCAAAAATAGCAGGACTAACCAAAGTACCAGCTATTGTCAAA
ACAATATCAGCACTTGAAAGCATGCAACAAGCCATTGTTGAAAATTTACAACGAGCTGACCTAAATGCCATCGAAGAAGC
CAAAGCCTACCAGTTACTTATTGACAAAAATAAGATGACTCATGAAGAGGTTGCCAAATATATGGGGAAATCCAGACCCT
ATATTAGCAATACCTTGCGCTTGTTACAACTACCAGATTCTATCCAGAGAGCCGTAGAAAATGGGGACATTAGTGCTGGT
CACGCGCGAGCCTTATTGGCTTTTTCTAATGAAAAAGAACAATTACTATATGCCACTAAAATCAAAAATGAAGGCATGAG
TGTTCGACAAATTGAACAATTGGTTACTCCGAAACCAAAAAAATCAAAAAAAGACAAGGATATTTTTGTCACTTCTTTAG
AAAAACAACTCGCCAAATCTCTTGGCTTAAAAGCAACTATTAAGTTGACATCACATCAGACTGGCCACTTGCAATTACCT
TTTGCTAATGAAGATGAACTAAACAGAATTATCAACAAGTTACTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58


Multiple sequence alignment