Detailed information NTG0403366

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: GL188_RS09780
• Genome accession: NZ_CP046359
• Coordinates: 1911235..1911639 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 573
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1906235..1916639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL188_RS09745 (GL188_09905)	rnpA	1906658..1907029 (-)	372	WP_000739247.1	ribonuclease P protein component	-
GL188_RS11310	-	1907046..1907177 (-)	132	WP_000768904.1	hypothetical protein	-
GL188_RS09750 (GL188_09910)	-	1907178..1908368 (-)	1191	WP_000167765.1	acetate kinase	-
GL188_RS09755 (GL188_09915)	comYH	1908419..1909372 (-)	954	WP_000345122.1	class I SAM-dependent methyltransferase	Machinery gene
GL188_RS09760 (GL188_09920)	-	1909433..1910020 (-)	588	WP_000679779.1	class I SAM-dependent methyltransferase	-
GL188_RS09765 (GL188_09925)	comGG/cglG	1910176..1910568 (-)	393	WP_001818028.1	competence type IV pilus minor pilin ComGG	Machinery gene
GL188_RS09770 (GL188_09930)	comGF/cglF	1910546..1911007 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
GL188_RS09775 (GL188_09935)	comGE/cglE	1910970..1911272 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
GL188_RS09780 (GL188_09940)	comGD/cglD	1911235..1911639 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
GL188_RS09785 (GL188_09945)	comGC/cglC	1911632..1911958 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
GL188_RS09790 (GL188_09950)	comGB/cglB	1911960..1912976 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
GL188_RS09795 (GL188_09955)	comGA/cglA/cilD	1912924..1913865 (-)	942	WP_000249555.1	competence type IV pilus ATPase ComGA	Machinery gene
GL188_RS09800 (GL188_09960)	-	1913940..1914305 (-)	366	WP_000286415.1	DUF1033 family protein	-
GL188_RS09805 (GL188_09965)	-	1914456..1915514 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=403366 GL188_RS09780 WP_000588030.1 1911235..1911639(-) (comGD/cglD) [Streptococcus pneumoniae strain 573]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=403366 GL188_RS09780 WP_000588030.1 1911235..1911639(-) (comGD/cglD) [Streptococcus pneumoniae strain 573]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463