Detailed information NTG0040298

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SALIVA_RS06430
• Genome accession: NC_017595
• Coordinates: 1350135..1351043 (+)
• Length: 302 a.a.
• NCBI ID: WP_014634658.1
• Uniprot ID: -
• Organism: Streptococcus salivarius JIM8777
• Function: activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 1345135..1356043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVA_RS06405 (SALIVA_1313)	-	1346192..1346635 (-)	444	WP_014634653.1	8-oxo-dGTP diphosphatase	-
SALIVA_RS06410 (SALIVA_1314)	-	1346696..1347217 (-)	522	WP_014634654.1	RDD family protein	-
SALIVA_RS06415 (SALIVA_1315)	comR	1347435..1348358 (+)	924	WP_014634655.1	XRE family transcriptional regulator	Regulator
SALIVA_RS06420 (SALIVA_1316)	-	1348431..1349267 (+)	837	WP_014634656.1	ABC transporter ATP-binding protein	-
SALIVA_RS06425 (SALIVA_1317)	-	1349260..1349979 (+)	720	WP_014634657.1	ABC transporter permease	-
SALIVA_RS06430 (SALIVA_1318)	comR	1350135..1351043 (+)	909	WP_014634658.1	transcriptional regulator	Regulator
SALIVA_RS10740	-	1351154..1351327 (-)	174	WP_231848722.1	hypothetical protein	-
SALIVA_RS10235 (SALIVA_2094)	-	1351362..1352045 (-)	684	WP_014634660.1	hypothetical protein	-
SALIVA_RS06440 (SALIVA_1320)	-	1352023..1352928 (-)	906	WP_014634661.1	hypothetical protein	-
SALIVA_RS06445 (SALIVA_1321)	-	1352996..1354240 (-)	1245	WP_014634662.1	hypothetical protein	-
SALIVA_RS06450 (SALIVA_1322)	-	1354883..1355668 (-)	786	WP_014634663.1	ABC transporter permease	-

Sequence

Protein

• Length: 302 a.a.
• Molecular weight: 35790.25 Da
• Isoelectric Point: 4.6631

>NTDB_id=40298 SALIVA_RS06430 WP_014634658.1 1350135..1351043(+) (comR) [Streptococcus salivarius JIM8777]
MSDDIKIEIGKRIREERERQELTREQVCDTEDELTVKQLMRIELGRSLPTIVKLQYISDKLGVSLNYLLGETKLDIPEEY
YRSKYKLMKSPVYGDTGRIKKKLKDIEDLYDNYIDVLPEEELLTIDIIERTLKFMIMEEEDPIEEVFEDYFTQVLRKDKY
SLNDLLLIKYYGFRCQIGDYDKEIVESFRCKLINQELQGEELVNVELLGALSTIAGIYVMHHDYRNMKTIVDKMHTVIDK
ILQHAYKPAVLIFEAKYYLYYENDINKARDLYNTATVLAEAFGDQVFIKNLKMEMEKDLNTK

Nucleotide

• Length: 909 bp

>NTDB_id=40298 SALIVA_RS06430 WP_014634658.1 1350135..1351043(+) (comR) [Streptococcus salivarius JIM8777]
ATGTCTGATGATATTAAAATCGAGATTGGAAAAAGAATTCGTGAAGAACGTGAACGACAAGAATTAACTCGTGAACAAGT
CTGTGATACTGAAGATGAATTAACCGTCAAACAATTGATGAGAATCGAGCTCGGTCGCTCATTGCCAACTATTGTCAAAC
TGCAGTATATCAGTGATAAACTAGGTGTTTCTCTCAACTATTTGCTAGGTGAAACAAAACTAGACATTCCTGAAGAGTAT
TATAGGTCTAAATATAAACTCATGAAATCCCCTGTCTATGGGGACACCGGACGTATCAAGAAGAAGCTAAAAGATATTGA
GGACCTATATGATAACTATATTGATGTTCTTCCTGAGGAGGAACTTCTAACCATTGATATTATTGAAAGAACGTTAAAGT
TTATGATTATGGAAGAGGAGGATCCTATTGAAGAGGTATTTGAAGATTATTTCACTCAAGTTTTGAGGAAGGATAAATAT
TCTTTAAATGACCTCTTATTAATTAAATACTATGGATTTCGATGTCAAATTGGTGACTATGATAAAGAAATTGTTGAAAG
TTTTCGATGCAAATTAATTAATCAAGAATTACAAGGGGAAGAGCTAGTTAATGTTGAACTACTTGGGGCATTGTCAACTA
TAGCTGGAATCTATGTGATGCATCATGATTATAGAAATATGAAAACTATTGTCGATAAAATGCATACTGTTATTGATAAG
ATACTACAACATGCTTACAAACCCGCCGTACTCATTTTTGAAGCAAAATACTATTTATATTATGAAAATGACATCAATAA
AGCAAGAGATCTCTATAATACGGCAACTGTTCTGGCTGAAGCTTTTGGCGACCAAGTTTTCATCAAAAATCTAAAAATGG
AAATGGAAAAAGATTTAAATACAAAATAG

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (77-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus thermophilus LMD-9	42.414	96.026	0.407
comR	Streptococcus thermophilus LMG 18311	42.414	96.026	0.407
comR	Streptococcus salivarius strain HSISS4	42.414	96.026	0.407
comR	Streptococcus salivarius SK126	42.254	94.04	0.397
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	38.305	97.682	0.374
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	37.801	96.358	0.364