Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   GLO74_RS06525 Genome accession   NZ_CP046354
Coordinates   1261119..1261769 (-) Length   216 a.a.
NCBI ID   WP_024477778.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 310     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1256119..1266769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GLO74_RS06505 (GLO74_06590) - 1256720..1257904 (-) 1185 WP_000655960.1 ABC transporter permease -
  GLO74_RS06510 (GLO74_06595) - 1257908..1258495 (-) 588 WP_000939895.1 ATP-binding cassette domain-containing protein -
  GLO74_RS06515 (GLO74_06600) - 1258528..1258716 (-) 189 WP_001808514.1 hypothetical protein -
  GLO74_RS06520 (GLO74_06605) comEC/celB 1258895..1261135 (-) 2241 WP_024477777.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  GLO74_RS06525 (GLO74_06610) comEA/celA/cilE 1261119..1261769 (-) 651 WP_024477778.1 ComEA family DNA-binding protein Machinery gene
  GLO74_RS06530 (GLO74_06615) - 1261837..1262406 (-) 570 WP_000443774.1 GNAT family N-acetyltransferase -
  GLO74_RS11020 ald 1262583..1263694 (+) 1112 Protein_1249 alanine dehydrogenase -
  GLO74_RS06550 (GLO74_06635) - 1263995..1264320 (-) 326 Protein_1250 TfoX/Sxy family protein -
  GLO74_RS06555 (GLO74_06640) - 1264323..1264824 (-) 502 Protein_1251 GNAT family N-acetyltransferase -
  GLO74_RS06565 (GLO74_06650) - 1265017..1265985 (-) 969 WP_000658183.1 PhoH family protein -
  GLO74_RS06570 (GLO74_06655) - 1266071..1266286 (-) 216 WP_001232085.1 YozE family protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23243.72 Da        Isoelectric Point: 6.0746

>NTDB_id=402970 GLO74_RS06525 WP_024477778.1 1261119..1261769(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain 310]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVKKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=402970 GLO74_RS06525 WP_024477778.1 1261119..1261769(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain 310]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGCGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACACCTGTCAAAGAAACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAAGAAGGAAGAGAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAACTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae D39

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae R6

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

97.685

100

0.977

  comEA/celA/cilE Streptococcus mitis NCTC 12261

96.759

100

0.968

  comEA/celA/cilE Streptococcus mitis SK321

90.741

100

0.907

  comEA Lactococcus lactis subsp. cremoris KW2

41.333

100

0.431

  comEA Latilactobacillus sakei subsp. sakei 23K

33.476

100

0.361


Multiple sequence alignment