Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SSAL_RS07375 Genome accession   NC_017594
Coordinates   1595963..1597699 (-) Length   578 a.a.
NCBI ID   WP_014633459.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1590963..1602699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS07355 (Ssal_01623) - 1591813..1592160 (-) 348 WP_045001880.1 DUF2200 domain-containing protein -
  SSAL_RS07360 (Ssal_01624) - 1592169..1592870 (-) 702 WP_014633456.1 glucosamine-6-phosphate deaminase -
  SSAL_RS07365 (Ssal_01625) queA 1593022..1594065 (+) 1044 WP_014633457.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  SSAL_RS07370 (Ssal_01626) rcrQ 1594163..1595950 (-) 1788 WP_014633458.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS07375 (Ssal_01627) rcrP 1595963..1597699 (-) 1737 WP_014633459.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS07380 (Ssal_01629) - 1597897..1598052 (-) 156 Protein_1451 LysR family transcriptional regulator -
  SSAL_RS07385 (Ssal_01630) - 1598062..1599615 (-) 1554 WP_013990980.1 BCCT family transporter -
  SSAL_RS10325 (Ssal_01631) - 1599732..1599854 (-) 123 WP_002269975.1 hypothetical protein -
  SSAL_RS07395 (Ssal_01632) rplL 1600063..1600431 (-) 369 WP_014633461.1 50S ribosomal protein L7/L12 -
  SSAL_RS07400 (Ssal_01633) rplJ 1600505..1601008 (-) 504 WP_004183007.1 50S ribosomal protein L10 -
  SSAL_RS07405 (Ssal_01635) - 1601298..1602506 (-) 1209 WP_014633462.1 ABC transporter permease -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64772.62 Da        Isoelectric Point: 5.2955

>NTDB_id=40200 SSAL_RS07375 WP_014633459.1 1595963..1597699(-) (rcrP) [Streptococcus salivarius 57.I]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDANQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQTSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=40200 SSAL_RS07375 WP_014633459.1 1595963..1597699(-) (rcrP) [Streptococcus salivarius 57.I]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCAGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTTATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCATGAGTATGAGCAGAT
TGGGGTATCTTCTTTGGTGACTCGTATCACGTCGGATGCCTTTGTTCTCATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTCTCCAGTGTCTTTTTGATTTTGACGACAAGTCCGTCTTTGGCTTGGATTGTGGCA
ATCTCCTTACCTTTCCTAGCCGTAGTTGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGTGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATAGCCATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCCATTAGGTTCTGGGACTTT
GGCTATCGGTGACTTGGTTGCCTTTATTGAGTACAGTTTCCATGCACTATTGTCCTTCCTCTTCCTAGCTAATCTTTTTA
CCATGTATCCTCGTACGGCGGTGTCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTTACCTTTGCCTATCCCGGTGAAACGGAGAG
TCCTGTCTTACACAATATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGCGAC
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGCAGCAACCTTTCTGGTGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGCCGTCTGAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGG
ATGCTAATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAACGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.662

92.042

0.365

Multiple sequence alignment