Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SSAL_RS07370 Genome accession   NC_017594
Coordinates   1594163..1595950 (-) Length   595 a.a.
NCBI ID   WP_014633458.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1589163..1600950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS07340 (Ssal_01620) - 1589780..1590274 (-) 495 WP_014633453.1 DUF6773 family protein -
  SSAL_RS07345 (Ssal_01621) - 1590288..1590485 (-) 198 WP_014633454.1 helix-turn-helix transcriptional regulator -
  SSAL_RS07350 (Ssal_01622) - 1590660..1591643 (-) 984 WP_002889116.1 rhodanese-related sulfurtransferase -
  SSAL_RS07355 (Ssal_01623) - 1591813..1592160 (-) 348 WP_045001880.1 DUF2200 domain-containing protein -
  SSAL_RS07360 (Ssal_01624) - 1592169..1592870 (-) 702 WP_014633456.1 glucosamine-6-phosphate deaminase -
  SSAL_RS07365 (Ssal_01625) queA 1593022..1594065 (+) 1044 WP_014633457.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  SSAL_RS07370 (Ssal_01626) rcrQ 1594163..1595950 (-) 1788 WP_014633458.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS07375 (Ssal_01627) rcrP 1595963..1597699 (-) 1737 WP_014633459.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS07380 (Ssal_01629) - 1597897..1598052 (-) 156 Protein_1451 LysR family transcriptional regulator -
  SSAL_RS07385 (Ssal_01630) - 1598062..1599615 (-) 1554 WP_013990980.1 BCCT family transporter -
  SSAL_RS10325 (Ssal_01631) - 1599732..1599854 (-) 123 WP_002269975.1 hypothetical protein -
  SSAL_RS07395 (Ssal_01632) rplL 1600063..1600431 (-) 369 WP_014633461.1 50S ribosomal protein L7/L12 -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66472.57 Da        Isoelectric Point: 5.2481

>NTDB_id=40199 SSAL_RS07370 WP_014633458.1 1594163..1595950(-) (rcrQ) [Streptococcus salivarius 57.I]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVIEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTDKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLVLVIGTVLYLNLQLGAIVVVTIPITFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=40199 SSAL_RS07370 WP_014633458.1 1594163..1595950(-) (rcrQ) [Streptococcus salivarius 57.I]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCTTGAAAATTGTTAGTGTCATCATGAGTGTCATTGAACCCGTAGTCATTGGTTTAGCTATTA
CAGAGCTGACCAAAAATACGCTGGCTATCATTAAGGGGGTAGAAGGCGCCCATATCAACGTATCCTATGTTGGTTTGGTT
CTGGTTGTTTATCTCTTGCGTGGTCTCATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACTGATAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGTCTTAGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCGTCAC
TATTCCCATTACTTTCTTTGGTGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAACTTTTTGGCCGTGAGGATAGATCTTTA
GACGACTTTAAAGAGATTACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTGT
CCTTAATGGTTTATCTGACTTGACCTATCTCATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAGTCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCCAATGATGCTACTGAAGT
GCTTGAAGGAGATTTGACCGGTCAGGTTAGCTTTAAGCATGTAGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGCGAAATGGTCGCCATTGTCGGCCCAACTGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTTTATGATGTGACGGCTGGTTCTATCTCGGTTGATGGTCATGATATTCGTAACTTATCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCGACTGACGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGACCACTTTATCCGTACGCTACCAGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCGAAAATTTTGATTTTGGACGAGGCAACCTCATCGGTTGATACCCGTTTGGAACTCTTGATTCAAAAGG
CTATGAAGACTCTCATGCAGGGTCGAACAAGCTTTGTCATCGCTCACCGTTTATCAACTATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTTCTTGCAGATAAAGGCTTCTATTACGATTT
GTATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.714

100

0.429

Multiple sequence alignment