Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SSAL_RS03040 Genome accession   NC_017594
Coordinates   607843..609588 (+) Length   581 a.a.
NCBI ID   WP_045001583.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 602843..614588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS03025 (Ssal_00660) - 602864..604393 (+) 1530 WP_014632839.1 DUF1310 family protein -
  SSAL_RS03030 (Ssal_00661) - 604374..604970 (+) 597 WP_013990250.1 hypothetical protein -
  SSAL_RS03035 (Ssal_00663) gshAB 605033..607297 (-) 2265 WP_013990251.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  SSAL_RS03040 (Ssal_00664) rcrP 607843..609588 (+) 1746 WP_045001583.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS03045 (Ssal_00665) rcrQ 609578..611446 (+) 1869 WP_014632841.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS03050 (Ssal_00666) - 611543..613062 (-) 1520 Protein_596 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 64762.50 Da        Isoelectric Point: 6.9515

>NTDB_id=40166 SSAL_RS03040 WP_045001583.1 607843..609588(+) (rcrP) [Streptococcus salivarius 57.I]
MFQTLIAQIKEYKKPSILASLFMTLEVMFEISIPFVMANLLDKGVQQSNMSNIWLYGGLMLVCAFLSLFCGMQSARYAAF
ASAGFAKNLRQAIFKKVQTFSFENIDKFSAGGLVTRMMTDVTNVRNSYQMIIRICVRAPLNLIFAIAASFLINGEMAWIF
VGVTLFLGLVLAVITKIVYPLFTQVFEAYDNLNNSIKENITNMRVVKSYVKEQEETDKFKKASRRIYKMFMRAIRVVIMS
NPAMMLSMYASFLMISWFGAHLIVIGKLSTGELTSMFSYTMTILISLMMFMMIFVMLSISMASVERINEVLNTDSTIVSP
ENGLTEVTDGSISFEHVDFSYTDENGDKTHVLKDITLDIKSGEVIGILGGTGSGKSSLVQLIPRLYDVEAGQVKVAGHDV
KDYDLDSLRKQVAMVLQTNVLFSGTIKENMRWGNKQATDEEIIEACKIAQADEFIQEFKDGYDTKIERGGANVSGGQRQR
LCIARALLMNPKILILDDSTSAVDTKTDSLIRQGLASSLKDTTKIIIGQRISSIQDADRIVVMDDGRIDAIGTHDELVAN
NAIYRDVYKMQTQGKGVADAK

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=40166 SSAL_RS03040 WP_045001583.1 607843..609588(+) (rcrP) [Streptococcus salivarius 57.I]
ATGTTTCAAACCCTGATCGCCCAGATAAAGGAATACAAGAAACCCTCAATCCTAGCGTCCCTCTTCATGACGCTAGAAGT
CATGTTTGAGATTTCCATTCCCTTTGTCATGGCCAATCTTTTGGACAAAGGTGTCCAGCAATCTAACATGTCTAACATTT
GGCTCTATGGTGGCCTCATGTTGGTCTGTGCCTTCCTGTCGCTTTTCTGCGGTATGCAGTCGGCACGCTATGCGGCCTTT
GCTTCTGCTGGATTTGCTAAGAATCTACGTCAGGCCATTTTCAAAAAGGTTCAAACCTTCTCTTTTGAAAATATCGATAA
GTTCTCAGCTGGTGGTTTGGTAACACGTATGATGACTGATGTTACCAACGTGCGGAACTCTTACCAGATGATTATCCGCA
TCTGTGTGCGCGCACCACTTAATCTGATCTTTGCCATTGCAGCAAGTTTCCTGATTAATGGTGAAATGGCTTGGATTTTC
GTTGGTGTAACACTCTTCCTTGGTCTGGTTTTGGCTGTTATTACCAAAATCGTATACCCTCTTTTTACTCAAGTGTTTGA
GGCTTATGACAACCTCAATAACAGTATCAAGGAAAATATCACTAACATGCGTGTGGTGAAATCCTACGTTAAAGAGCAGG
AAGAGACAGATAAGTTCAAGAAAGCTTCACGCCGCATTTACAAGATGTTCATGCGTGCTATTCGTGTGGTTATCATGTCT
AACCCAGCCATGATGTTGTCTATGTATGCGTCCTTTCTCATGATTTCCTGGTTTGGTGCTCATCTTATCGTTATCGGCAA
GCTATCTACAGGTGAATTGACTTCCATGTTCAGTTACACCATGACTATCCTAATCTCACTTATGATGTTCATGATGATCT
TTGTCATGTTGTCTATCTCTATGGCTTCTGTAGAGCGTATCAATGAAGTGCTCAACACTGATTCAACCATTGTTTCACCT
GAAAATGGCTTGACAGAGGTCACAGATGGTTCTATCAGTTTTGAGCATGTGGATTTCTCATACACAGATGAAAATGGTGA
TAAGACCCATGTTCTCAAAGATATTACGCTTGATATTAAGTCTGGTGAAGTTATCGGTATTCTTGGTGGAACAGGTTCTG
GTAAATCAAGCTTGGTTCAGCTCATTCCTCGTCTTTATGATGTGGAAGCCGGTCAAGTTAAGGTTGCAGGCCACGATGTT
AAGGACTATGATTTGGATAGCTTGCGTAAGCAAGTTGCCATGGTGCTTCAAACCAACGTCCTTTTCTCAGGAACCATTAA
GGAAAATATGCGTTGGGGAAATAAACAGGCGACAGATGAGGAAATCATTGAAGCTTGTAAGATTGCCCAAGCTGATGAAT
TTATCCAAGAGTTTAAGGATGGCTATGACACCAAGATTGAACGTGGTGGAGCCAATGTCTCAGGGGGACAACGTCAACGT
CTCTGTATCGCACGTGCCCTCCTCATGAATCCAAAAATCTTGATTCTTGATGATTCAACATCAGCGGTTGATACTAAGAC
AGATAGTTTGATTCGTCAAGGTTTGGCATCAAGTCTTAAGGACACCACTAAGATTATCATCGGTCAACGTATTTCATCCA
TCCAAGATGCAGACCGCATCGTTGTTATGGATGATGGCCGAATCGATGCCATTGGTACTCACGATGAATTGGTGGCTAAC
AATGCCATTTATCGTGACGTCTACAAGATGCAAACACAAGGGAAAGGAGTAGCAGATGCAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-501)

ABC transporter transmembrane region (ABC_membrane)

(19-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.473

100

0.361

Multiple sequence alignment