Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   GIG89_RS09430 Genome accession   NZ_CP045924
Coordinates   1869655..1870872 (+) Length   405 a.a.
NCBI ID   WP_019291567.1    Uniprot ID   A0AAJ2IZW6
Organism   Lactococcus petauri strain CF11     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1864655..1875872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GIG89_RS09400 eeP 1864666..1865913 (-) 1248 WP_153925433.1 RIP metalloprotease RseP Regulator
  GIG89_RS09405 - 1866090..1866884 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  GIG89_RS09410 - 1866881..1867618 (-) 738 WP_019291564.1 isoprenyl transferase -
  GIG89_RS09415 yajC 1867818..1868153 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  GIG89_RS09420 - 1868228..1868875 (-) 648 WP_153925436.1 DNA alkylation repair protein -
  GIG89_RS09425 rlmH 1868872..1869351 (-) 480 WP_153925439.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GIG89_RS09430 htrA 1869655..1870872 (+) 1218 WP_019291567.1 trypsin-like peptidase domain-containing protein Regulator
  GIG89_RS09435 - 1870969..1871967 (+) 999 WP_019291568.1 glycosyltransferase family 4 protein -
  GIG89_RS09440 - 1871980..1873314 (+) 1335 WP_019291569.1 glycosyltransferase family 4 protein -
  GIG89_RS09445 - 1873365..1873589 (+) 225 WP_003133519.1 DUF1797 family protein -
  GIG89_RS09450 - 1873618..1874667 (-) 1050 WP_153925442.1 BMP family protein -
  GIG89_RS09460 - 1874826..1875575 (-) 750 WP_153925445.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -

Sequence

Protein


Download         Length: 405 a.a.        Molecular weight: 41831.68 Da        Isoelectric Point: 4.8866

>NTDB_id=399208 GIG89_RS09430 WP_019291567.1 1869655..1870872(+) (htrA) [Lactococcus petauri strain CF11]
MAKKNIASLLITGVAGGAIALGGSAIYQNMTNTPSSNNTSDNSVSTVNVQVNTDTTKAIKKISNTVVSVLNYQKSSSSND
FEKIFGGGDTSSNESNTPQLAGEGSGVIYKKDGNTAYIVTNYHVIEGASSLEVLMAGGQKVTAEVVGSDAYSDLAVLKID
AKYVKETATFGNSDKLTVGEPAIAVGSPLGSEYANSATEGIVSSLNRNVTLQNSQGQTINVNAIQTDAAINPGNSGGALI
NIQGQVIGITSSKITSTPSGTSSSGVSVEGMGFAIPANDVVNIINKLEKDGKVIRPALGVQMVNLSSLSQNMLASLNLPE
NVTNGVAIAEVQSGMPAAKAGLKQGDVIVKINDDEITSSVNLQSTLYKSSIGDTIKVTYYRDGKQATANIKLDKTSSDIN
FDKQN

Nucleotide


Download         Length: 1218 bp        

>NTDB_id=399208 GIG89_RS09430 WP_019291567.1 1869655..1870872(+) (htrA) [Lactococcus petauri strain CF11]
ATGGCAAAAAAAAATATCGCCTCATTACTTATTACAGGCGTAGCCGGGGGTGCTATCGCTCTCGGAGGTAGTGCTATCTA
CCAAAATATGACCAACACGCCGTCATCTAACAACACTTCGGACAATTCTGTAAGTACAGTTAACGTCCAAGTAAATACAG
ATACTACAAAAGCAATCAAGAAAATTTCGAACACTGTTGTTTCCGTTCTTAATTACCAAAAATCGTCCTCAAGCAACGAT
TTTGAGAAGATTTTCGGCGGAGGCGATACAAGTAGCAATGAGAGTAATACGCCACAGCTGGCTGGAGAGGGTTCTGGTGT
TATTTACAAAAAGGATGGCAATACAGCATATATCGTCACCAACTATCACGTTATTGAAGGTGCTTCTTCCTTAGAAGTTC
TCATGGCCGGCGGTCAAAAAGTTACTGCTGAAGTTGTTGGTTCTGATGCTTATTCTGATTTAGCTGTCCTCAAAATTGAT
GCTAAGTATGTCAAAGAAACAGCAACATTCGGCAACTCTGACAAACTTACTGTTGGTGAGCCCGCTATCGCGGTGGGTTC
TCCCCTTGGAAGTGAGTATGCAAACTCAGCAACAGAAGGAATTGTTTCAAGTCTAAATCGCAATGTTACACTGCAAAACA
GCCAAGGCCAAACAATTAATGTTAACGCTATTCAAACCGATGCAGCTATTAACCCCGGTAACTCTGGTGGTGCACTCATA
AATATTCAAGGACAAGTCATCGGGATTACCTCAAGTAAAATTACCTCAACACCAAGCGGAACAAGCAGTAGTGGTGTCTC
TGTAGAAGGTATGGGATTTGCGATTCCAGCCAATGATGTCGTTAACATTATCAATAAGTTGGAAAAAGATGGCAAAGTTA
TTCGACCTGCTCTCGGTGTACAAATGGTCAACTTGTCAAGTCTTTCCCAAAACATGTTAGCTTCACTTAACCTTCCTGAA
AACGTGACTAACGGTGTTGCTATCGCTGAAGTTCAATCAGGAATGCCTGCTGCCAAAGCTGGACTCAAGCAAGGCGACGT
TATTGTCAAAATCAATGATGACGAAATCACTTCAAGCGTGAACCTTCAAAGTACACTTTATAAGTCTTCAATTGGTGATA
CGATTAAGGTAACTTATTATCGTGACGGAAAACAGGCTACTGCGAATATCAAATTGGATAAAACAAGTAGTGATATCAAC
TTTGACAAACAAAATTAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(104-249)

Peptidase family M50 (Peptidase_M50)

(288-396)

PDZ domain (PDZ_2)

(296-392)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

54.476

96.543

0.526
  htrA Streptococcus mutans UA159

56.349

93.333

0.526
  htrA Streptococcus mitis NCTC 12261

52.882

98.519

0.521
  htrA Streptococcus pneumoniae TIGR4

52.632

98.519

0.519
  htrA Streptococcus pneumoniae D39

52.632

98.519

0.519
  htrA Streptococcus pneumoniae Rx1

52.632

98.519

0.519
  htrA Streptococcus pneumoniae R6

52.632

98.519

0.519

Multiple sequence alignment