Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GIG89_RS09400 Genome accession   NZ_CP045924
Coordinates   1864666..1865913 (-) Length   415 a.a.
NCBI ID   WP_153925433.1    Uniprot ID   -
Organism   Lactococcus petauri strain CF11     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1859666..1870913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GIG89_RS10430 - 1861194..1861841 (-) 648 Protein_1835 PolC-type DNA polymerase III N-terminal domain-containing protein -
  GIG89_RS09390 - 1861947..1862321 (-) 375 WP_019291560.1 hypothetical protein -
  GIG89_RS09395 - 1862789..1864639 (-) 1851 WP_153925430.1 proline--tRNA ligase -
  GIG89_RS09400 eeP 1864666..1865913 (-) 1248 WP_153925433.1 RIP metalloprotease RseP Regulator
  GIG89_RS09405 - 1866090..1866884 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  GIG89_RS09410 - 1866881..1867618 (-) 738 WP_019291564.1 isoprenyl transferase -
  GIG89_RS09415 yajC 1867818..1868153 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  GIG89_RS09420 - 1868228..1868875 (-) 648 WP_153925436.1 DNA alkylation repair protein -
  GIG89_RS09425 rlmH 1868872..1869351 (-) 480 WP_153925439.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GIG89_RS09430 htrA 1869655..1870872 (+) 1218 WP_019291567.1 trypsin-like peptidase domain-containing protein Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45089.51 Da        Isoelectric Point: 5.8072

>NTDB_id=399207 GIG89_RS09400 WP_153925433.1 1864666..1865913(-) (eeP) [Lactococcus petauri strain CF11]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYIRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLVSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=399207 GIG89_RS09400 WP_153925433.1 1864666..1865913(-) (eeP) [Lactococcus petauri strain CF11]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTATTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATATCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGCGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAACTGGGAAGAAGTTGTCCAA
AGGATCGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATCGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACTGGCTTTTTAGATAAGCTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGACCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGTCTAGTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATCCCAATCCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATCTTAACACTTGTTGGTCTTGTCTTTATGGTGGTCTTG
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(204-256)

(7-400)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.847

100

0.564

  eeP Streptococcus thermophilus LMD-9

55.609

100

0.561


Multiple sequence alignment