Detailed information NTG0399196

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: GIG89_RS05190
• Genome accession: NZ_CP045924
• Coordinates: 1059808..1060677 (-)
• Length: 289 a.a.
• NCBI ID: WP_019291673.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain CF11
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1054808..1065677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GIG89_RS05175	-	1055782..1056003 (+)	222	WP_019292266.1	hypothetical protein	-
GIG89_RS05180	trmFO	1056077..1057420 (-)	1344	WP_153924852.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
GIG89_RS05185	topA	1057469..1059619 (-)	2151	WP_153925516.1	type I DNA topoisomerase	-
GIG89_RS05190	dprA	1059808..1060677 (-)	870	WP_019291673.1	DNA-processing protein DprA	Machinery gene
GIG89_RS05195	budA	1060764..1061462 (-)	699	WP_019291674.1	acetolactate decarboxylase	-
GIG89_RS05200	-	1061608..1063332 (-)	1725	WP_153924855.1	ABC transporter permease/substrate binding protein	-
GIG89_RS05205	-	1063325..1064527 (-)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
GIG89_RS05210	-	1064733..1065353 (-)	621	WP_019291676.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32915.11 Da
• Isoelectric Point: 9.9099

>NTDB_id=399196 GIG89_RS05190 WP_019291673.1 1059808..1060677(-) (dprA) [Lactococcus petauri strain CF11]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEARLTLRQLSRIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=399196 GIG89_RS05190 WP_019291673.1 1059808..1060677(-) (dprA) [Lactococcus petauri strain CF11]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAGACTCACTCTACGCCAGTTATCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCACCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGCAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCACAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGAGTTGTCGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis SK321	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	52.688	96.54	0.509
dprA	Latilactobacillus sakei subsp. sakei 23K	38.909	95.156	0.37