Detailed information NTG0039670

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: VVMO6_RS02740
• Genome accession: NC_014965
• Coordinates: 556096..557145 (+)
• Length: 349 a.a.
• NCBI ID: WP_011079524.1
• Uniprot ID: Q7MHR4
• Organism: Vibrio vulnificus MO6-24/O
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 551096..562145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVMO6_RS02725 (VVM_00967)	rpoS	551746..552738 (+)	993	WP_011079521.1	RNA polymerase sigma factor RpoS	Regulator
VVMO6_RS02730 (VVM_00972)	mutS	552814..555375 (-)	2562	WP_013571127.1	DNA mismatch repair protein MutS	-
VVMO6_RS02735 (VVM_00973)	pncC	555459..555962 (+)	504	WP_013571128.1	nicotinamide-nucleotide amidase	-
VVMO6_RS02740 (VVM_00974)	recA	556096..557145 (+)	1050	WP_011079524.1	recombinase RecA	Machinery gene
VVMO6_RS02745 (VVM_00976)	recX	557249..557710 (+)	462	WP_013571129.1	recombination regulator RecX	-
VVMO6_RS02750 (VVM_00977)	alaS	557890..560472 (+)	2583	WP_013571130.1	alanine--tRNA ligase	-
VVMO6_RS02755 (VVM_00981)	-	560669..561856 (+)	1188	WP_011151141.1	aspartate kinase	-
VVMO6_RS02760 (VVM_00982)	csrA	561948..562139 (+)	192	WP_011079528.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37738.34 Da
• Isoelectric Point: 4.8857

>NTDB_id=39670 VVMO6_RS02740 WP_011079524.1 556096..557145(+) (recA) [Vibrio vulnificus MO6-24/O]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDQLLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKCKLIEKSGAWYSYNGDKIGQGKANACKYLKENVDVAKVLDT
KLREMLLSPANINDESAELVEEMPEQEEF

Nucleotide

• Length: 1050 bp

>NTDB_id=39670 VVMO6_RS02740 WP_011079524.1 556096..557145(+) (recA) [Vibrio vulnificus MO6-24/O]
ATGGACGAGAACAAACAGAAGGCACTGGCCGCCGCACTAGGTCAAATTGAAAAGCAGTTCGGTAAAGGTTCAATCATGCG
CCTAGGTGACAACCGTGCGATGGATGTTGAAACCATCTCGACAGGTTCACTATCTCTGGATATTGCGCTGGGTGCTGGTG
GCTTACCAATGGGCCGTATCGTTGAAATTTTTGGTCCAGAATCTTCAGGTAAAACCACGTTGACCCTTGAGCTGATCGCT
GCGGCTCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCCGAGCACGCGTTGGATCCTGTGTATGCGAAGAAGCTTGG
CGTTAATATCGACCAGTTGTTGGTATCTCAGCCCGACACCGGTGAACAAGCGTTGGAAATCTGTGATGCTCTTGCTCGCT
CAGGTGCGGTTGACGTTATTGTTGTCGACTCTGTTGCAGCATTGACGCCAAAGGCAGAAATCGAAGGTGAGATGGGCGAC
TCGCACATGGGTCTTCAAGCTCGTATGCTATCTCAAGCGATGCGTAAGTTAACGGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACCACAACGGGTGGTAACGCTC
TGAAATTCTACGCTTCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATCAAAGAAGGTGATGAGGTCGTGGGTAACGAA
ACGCGCATCAAAGTGGTGAAGAATAAGATCGCTGCGCCGTTTAAAGAAGCCAACACTCAAATTATGTACGGCCAAGGCTT
TAACCGCGAAGGTGAACTGATTGACCTAGGCGTGAAATGTAAGCTGATTGAAAAATCAGGCGCTTGGTACAGCTATAACG
GCGACAAAATTGGCCAAGGTAAAGCGAACGCTTGTAAGTACCTGAAAGAAAACGTAGATGTCGCAAAAGTACTGGATACG
AAATTGCGTGAAATGTTGCTTTCTCCAGCAAACATCAACGATGAATCGGCAGAGTTAGTCGAAGAAATGCCAGAGCAAGA
AGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: Q7MHR4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	96.084	95.129	0.914
recA	Vibrio cholerae O1 biovar El Tor strain E7946	96.084	95.129	0.914
recA	Pseudomonas stutzeri DSM 10701	74.398	95.129	0.708
recA	Glaesserella parasuis strain SC1401	69.492	100	0.705
recA	Acinetobacter baylyi ADP1	70.145	98.854	0.693
recA	Acinetobacter baumannii D1279779	73.171	93.983	0.688
recA	Neisseria gonorrhoeae MS11	65.805	99.713	0.656
recA	Neisseria gonorrhoeae MS11	65.805	99.713	0.656
recA	Neisseria gonorrhoeae strain FA1090	65.805	99.713	0.656
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.112	0.633
recA	Helicobacter pylori strain NCTC11637	59.884	98.567	0.59
recA	Helicobacter pylori 26695	59.593	98.567	0.587
recA	Streptococcus pneumoniae Rx1	58.571	100	0.587
recA	Streptococcus pneumoniae R6	58.571	100	0.587
recA	Streptococcus pneumoniae D39	58.571	100	0.587
recA	Streptococcus pneumoniae TIGR4	58.571	100	0.587
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.241	90.544	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	91.977	0.582
recA	Streptococcus mitis SK321	61.92	92.55	0.573
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	94.842	0.573
recA	Lactococcus lactis subsp. cremoris KW2	61.61	92.55	0.57
recA	Streptococcus mitis NCTC 12261	61.61	92.55	0.57
recA	Latilactobacillus sakei subsp. sakei 23K	61.682	91.977	0.567
recA	Streptococcus pyogenes NZ131	60.615	93.123	0.564
recA	Streptococcus mutans UA159	60.615	93.123	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.258	88.825	0.553