Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FIU87_RS20735 | Genome accession | NZ_CP045403 |
| Coordinates | 4068144..4068647 (-) | Length | 167 a.a. |
| NCBI ID | WP_152446335.1 | Uniprot ID | A0A5P9HVC6 |
| Organism | Bacillus sp. THAF10 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4063144..4073647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU87_RS20715 (FIU87_21280) | rplI | 4064312..4064761 (-) | 450 | WP_152446332.1 | 50S ribosomal protein L9 | - |
| FIU87_RS20720 (FIU87_21285) | - | 4064758..4066728 (-) | 1971 | WP_152446333.1 | DHH family phosphoesterase | - |
| FIU87_RS20725 (FIU87_21290) | - | 4066754..4067692 (-) | 939 | WP_152446334.1 | YybS family protein | - |
| FIU87_RS20730 (FIU87_21295) | rpsR | 4067839..4068078 (-) | 240 | WP_047969622.1 | 30S ribosomal protein S18 | - |
| FIU87_RS20735 (FIU87_21300) | ssbA | 4068144..4068647 (-) | 504 | WP_152446335.1 | single-stranded DNA-binding protein | Machinery gene |
| FIU87_RS20740 (FIU87_21305) | rpsF | 4068693..4068983 (-) | 291 | WP_152446336.1 | 30S ribosomal protein S6 | - |
| FIU87_RS20745 (FIU87_21310) | ychF | 4069436..4070536 (-) | 1101 | WP_152446337.1 | redox-regulated ATPase YchF | - |
| FIU87_RS20750 (FIU87_21315) | - | 4070889..4072514 (-) | 1626 | WP_152446694.1 | DASS family sodium-coupled anion symporter | - |
| FIU87_RS20755 (FIU87_21320) | - | 4072646..4072858 (-) | 213 | WP_152446695.1 | DUF951 domain-containing protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18511.22 Da Isoelectric Point: 4.9719
>NTDB_id=393827 FIU87_RS20735 WP_152446335.1 4068144..4068647(-) (ssbA) [Bacillus sp. THAF10]
MLNRVVLVGRLTKDPELRYTPSGVAVATFTLAVNRTFSNQQGEREADFINCVVWRKQAENAANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVVAESVQFLEPKGSGGGNAPRPNQNQGYGSSSSFGYDQNQQRNNNNNQGYRVDDDPFKNDGQPIDI
SDDDLPF
MLNRVVLVGRLTKDPELRYTPSGVAVATFTLAVNRTFSNQQGEREADFINCVVWRKQAENAANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVVAESVQFLEPKGSGGGNAPRPNQNQGYGSSSSFGYDQNQQRNNNNNQGYRVDDDPFKNDGQPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=393827 FIU87_RS20735 WP_152446335.1 4068144..4068647(-) (ssbA) [Bacillus sp. THAF10]
ATGTTAAATCGCGTAGTATTGGTCGGCCGTTTAACGAAAGACCCTGAATTGCGCTATACCCCAAGTGGAGTGGCGGTTGC
TACTTTTACACTAGCAGTTAACCGTACGTTCTCTAATCAGCAGGGCGAACGCGAAGCTGATTTTATTAACTGTGTTGTTT
GGAGAAAGCAAGCAGAAAACGCAGCAAACTACTTGAAAAAAGGAAGTTTAGCTGGTGTGGATGGCAGGCTGCAAACACGC
AATTATGAAGGCCAAGATGGAAAACGTGTATACGTAACCGAAGTAGTGGCAGAAAGCGTTCAATTCCTTGAGCCTAAAGG
TTCAGGTGGTGGAAATGCTCCTCGCCCTAATCAAAATCAAGGCTATGGTTCATCATCTTCGTTTGGGTACGATCAGAACC
AACAGCGCAACAATAACAACAACCAAGGTTATCGTGTTGATGACGATCCATTTAAAAATGATGGCCAGCCAATAGATATA
TCTGATGACGATTTGCCGTTCTAA
ATGTTAAATCGCGTAGTATTGGTCGGCCGTTTAACGAAAGACCCTGAATTGCGCTATACCCCAAGTGGAGTGGCGGTTGC
TACTTTTACACTAGCAGTTAACCGTACGTTCTCTAATCAGCAGGGCGAACGCGAAGCTGATTTTATTAACTGTGTTGTTT
GGAGAAAGCAAGCAGAAAACGCAGCAAACTACTTGAAAAAAGGAAGTTTAGCTGGTGTGGATGGCAGGCTGCAAACACGC
AATTATGAAGGCCAAGATGGAAAACGTGTATACGTAACCGAAGTAGTGGCAGAAAGCGTTCAATTCCTTGAGCCTAAAGG
TTCAGGTGGTGGAAATGCTCCTCGCCCTAATCAAAATCAAGGCTATGGTTCATCATCTTCGTTTGGGTACGATCAGAACC
AACAGCGCAACAATAACAACAACCAAGGTTATCGTGTTGATGACGATCCATTTAAAAATGATGGCCAGCCAATAGATATA
TCTGATGACGATTTGCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
71.429 |
100 |
0.749 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.227 |
100 |
0.635 |
| ssb | Glaesserella parasuis strain SC1401 |
36.957 |
100 |
0.407 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
63.473 |
0.407 |
| ssb | Neisseria meningitidis MC58 |
34.857 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
34.857 |
100 |
0.365 |