Detailed information NTG0393339

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GCS73_RS04875
• Genome accession: NZ_CP045308
• Coordinates: 1004991..1006055 (+)
• Length: 354 a.a.
• NCBI ID: WP_003632474.1
• Uniprot ID: -
• Organism: Legionella longbeachae strain B41211CHC
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 999991..1011055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GCS73_RS04865 (GCS73_04820)	-	1000747..1003113 (-)	2367	WP_012978909.1	penicillin-binding protein 1A	-
GCS73_RS04870 (GCS73_04825)	-	1003324..1004754 (-)	1431	WP_003632475.1	hypothetical protein	-
GCS73_RS04875 (GCS73_04830)	pilM	1004991..1006055 (+)	1065	WP_003632474.1	type IV pilus assembly protein PilM	Machinery gene
GCS73_RS04880 (GCS73_04835)	pilN	1006060..1006623 (+)	564	WP_003632473.1	PilN domain-containing protein	Machinery gene
GCS73_RS04885 (GCS73_04840)	pilO	1006620..1007219 (+)	600	WP_012978910.1	type 4a pilus biogenesis protein PilO	Machinery gene
GCS73_RS04890 (GCS73_04845)	pilP	1007216..1007722 (+)	507	WP_003632471.1	pilus assembly protein PilP	Machinery gene
GCS73_RS04895 (GCS73_04850)	pilQ	1007731..1009836 (+)	2106	WP_012978911.1	type IV pilus secretin PilQ	Machinery gene
GCS73_RS04900 (GCS73_04855)	aroK	1010172..1010699 (+)	528	WP_003632469.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 39125.36 Da
• Isoelectric Point: 5.1674

>NTDB_id=393339 GCS73_RS04875 WP_003632474.1 1004991..1006055(+) (pilM) [Legionella longbeachae strain B41211CHC]
MLKLLQPQHRSILGIDITSTAVKILEISGKNNELVIENYGREILPPNAMDGNVIKDLDAVSQCVKKIVDRLHTPCKQAAL
AVPDAAIISKVVQINEGLNEEEMEELIATEADKYIPYPIEEINLDFEVLGPHQKNPHLLDVLIVASRAENVNQRVGIAAA
AGLDTVVVDVESYAVERAAQRIALDLPGLGKDKTIAIIDIGACYTHLFVLHRMKLVYSREEKFGDKQLIESIAERYKMTL
EEAALARDKKQLPSNYETEVLEPFKENILLQIKRTLQFFYSTNQDGDVDHILLAGGLAKLPGLVALVKDRLGKTTIIANP
LSYMTPSKKIHLDAINNDAPALMVACGLALRNIE

Nucleotide

• Length: 1065 bp

>NTDB_id=393339 GCS73_RS04875 WP_003632474.1 1004991..1006055(+) (pilM) [Legionella longbeachae strain B41211CHC]
ATGCTCAAATTACTACAACCTCAGCATCGTTCAATTCTCGGAATAGACATTACATCCACGGCAGTCAAAATATTAGAAAT
CTCAGGTAAGAATAATGAGCTTGTTATAGAGAATTACGGACGAGAAATATTACCACCCAATGCAATGGATGGTAATGTTA
TTAAGGATCTTGATGCAGTTTCCCAATGTGTTAAAAAAATAGTTGACCGATTGCATACCCCATGTAAGCAAGCTGCTTTG
GCTGTGCCAGATGCTGCGATAATCAGTAAAGTAGTGCAAATTAATGAAGGCTTAAATGAAGAGGAGATGGAGGAGCTTAT
CGCTACTGAGGCTGATAAATATATTCCTTATCCAATTGAGGAAATTAATCTTGATTTCGAAGTTTTAGGTCCGCATCAGA
AAAATCCGCATCTACTCGATGTACTTATCGTTGCTTCGCGAGCGGAGAATGTGAACCAACGTGTTGGAATAGCGGCGGCT
GCGGGTTTAGATACAGTGGTTGTAGATGTTGAGTCTTACGCTGTGGAGCGAGCAGCACAACGTATTGCTTTAGATTTACC
AGGACTTGGTAAAGATAAAACAATTGCGATTATTGATATTGGAGCATGTTATACCCATTTATTTGTATTGCATAGAATGA
AATTAGTTTATTCCCGAGAAGAAAAATTTGGTGATAAGCAATTAATTGAATCAATTGCTGAACGCTATAAAATGACCTTG
GAAGAGGCAGCTCTTGCCAGGGATAAAAAACAATTACCTTCTAACTATGAAACGGAAGTTTTAGAACCATTTAAAGAAAA
TATCTTGTTACAGATTAAAAGAACCTTGCAGTTTTTTTATTCTACAAACCAAGATGGAGATGTGGATCATATTTTATTAG
CAGGGGGATTAGCCAAATTACCAGGCTTAGTTGCTTTAGTTAAAGACCGTTTAGGAAAAACAACTATTATTGCTAATCCA
CTTTCATATATGACCCCAAGTAAAAAAATCCATTTGGATGCAATAAATAATGATGCACCCGCACTTATGGTAGCTTGTGG
TTTAGCATTAAGAAATATAGAGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Legionella pneumophila strain ERS1305867	66.667	100	0.667
pilM	Acinetobacter baumannii D1279779	42.655	100	0.427
comM	Acinetobacter nosocomialis M2	42.655	100	0.427
comM	Acinetobacter baylyi ADP1	40.678	100	0.407