Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GCS73_RS04880 | Genome accession | NZ_CP045308 |
| Coordinates | 1006060..1006623 (+) | Length | 187 a.a. |
| NCBI ID | WP_003632473.1 | Uniprot ID | D3HQQ0 |
| Organism | Legionella longbeachae strain B41211CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1001060..1011623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCS73_RS04870 (GCS73_04825) | - | 1003324..1004754 (-) | 1431 | WP_003632475.1 | hypothetical protein | - |
| GCS73_RS04875 (GCS73_04830) | pilM | 1004991..1006055 (+) | 1065 | WP_003632474.1 | type IV pilus assembly protein PilM | Machinery gene |
| GCS73_RS04880 (GCS73_04835) | pilN | 1006060..1006623 (+) | 564 | WP_003632473.1 | PilN domain-containing protein | Machinery gene |
| GCS73_RS04885 (GCS73_04840) | pilO | 1006620..1007219 (+) | 600 | WP_012978910.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GCS73_RS04890 (GCS73_04845) | pilP | 1007216..1007722 (+) | 507 | WP_003632471.1 | pilus assembly protein PilP | Machinery gene |
| GCS73_RS04895 (GCS73_04850) | pilQ | 1007731..1009836 (+) | 2106 | WP_012978911.1 | type IV pilus secretin PilQ | Machinery gene |
| GCS73_RS04900 (GCS73_04855) | aroK | 1010172..1010699 (+) | 528 | WP_003632469.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 187 a.a. Molecular weight: 21920.72 Da Isoelectric Point: 7.3178
>NTDB_id=393340 GCS73_RS04880 WP_003632473.1 1006060..1006623(+) (pilN) [Legionella longbeachae strain B41211CHC]
MTQINLLPWREQKREQEKKLFMVLFFIVIALSIFIVFLINTYASDLVSNQLVRNQMLQDEIAAMNSQLIEIKNLKKTREL
FISRMFIVQHLQSTRTLMVHLFDELINVMPSGIYLTKVEGKNDILSVTGYTESNTYVSILMKNIEINEWIHSPVLSEIKK
EDRQEPANNEFKLNFVLAPQFQLGIIR
MTQINLLPWREQKREQEKKLFMVLFFIVIALSIFIVFLINTYASDLVSNQLVRNQMLQDEIAAMNSQLIEIKNLKKTREL
FISRMFIVQHLQSTRTLMVHLFDELINVMPSGIYLTKVEGKNDILSVTGYTESNTYVSILMKNIEINEWIHSPVLSEIKK
EDRQEPANNEFKLNFVLAPQFQLGIIR
Nucleotide
Download Length: 564 bp
>NTDB_id=393340 GCS73_RS04880 WP_003632473.1 1006060..1006623(+) (pilN) [Legionella longbeachae strain B41211CHC]
ATGACACAAATTAATCTTCTTCCTTGGCGAGAACAAAAGCGGGAGCAAGAAAAAAAGCTGTTCATGGTGTTATTTTTCAT
AGTTATAGCGCTTTCAATATTTATTGTGTTTTTAATTAATACTTATGCCTCTGATTTAGTAAGTAATCAACTTGTTCGAA
ATCAGATGCTGCAAGATGAAATAGCGGCTATGAATAGCCAGTTAATTGAAATTAAAAATTTGAAAAAAACTCGAGAATTA
TTCATTTCCAGAATGTTTATAGTTCAGCATTTGCAATCAACCAGAACCTTGATGGTTCATTTATTTGATGAATTAATTAA
TGTAATGCCTTCCGGTATTTATTTAACAAAGGTAGAAGGAAAAAATGATATTCTTTCAGTCACTGGTTATACTGAATCAA
ATACCTATGTTTCAATTTTAATGAAAAATATAGAAATTAATGAATGGATCCATTCTCCTGTTCTGAGCGAAATTAAGAAG
GAAGACCGTCAGGAACCTGCTAATAATGAATTTAAGTTAAATTTTGTTCTTGCCCCTCAATTTCAGTTGGGGATTATACG
ATGA
ATGACACAAATTAATCTTCTTCCTTGGCGAGAACAAAAGCGGGAGCAAGAAAAAAAGCTGTTCATGGTGTTATTTTTCAT
AGTTATAGCGCTTTCAATATTTATTGTGTTTTTAATTAATACTTATGCCTCTGATTTAGTAAGTAATCAACTTGTTCGAA
ATCAGATGCTGCAAGATGAAATAGCGGCTATGAATAGCCAGTTAATTGAAATTAAAAATTTGAAAAAAACTCGAGAATTA
TTCATTTCCAGAATGTTTATAGTTCAGCATTTGCAATCAACCAGAACCTTGATGGTTCATTTATTTGATGAATTAATTAA
TGTAATGCCTTCCGGTATTTATTTAACAAAGGTAGAAGGAAAAAATGATATTCTTTCAGTCACTGGTTATACTGAATCAA
ATACCTATGTTTCAATTTTAATGAAAAATATAGAAATTAATGAATGGATCCATTCTCCTGTTCTGAGCGAAATTAAGAAG
GAAGACCGTCAGGAACCTGCTAATAATGAATTTAAGTTAAATTTTGTTCTTGCCCCTCAATTTCAGTTGGGGATTATACG
ATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
62.295 |
97.861 |
0.61 |