Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR1 | Type | Regulator |
| Locus tag | F5989_RS04625 | Genome accession | NZ_CP044221 |
| Coordinates | 951335..952237 (+) | Length | 300 a.a. |
| NCBI ID | WP_002289708.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain NCH105 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 946335..957237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F5989_RS04600 (F5989_04665) | rimI | 947164..947598 (-) | 435 | WP_002351170.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| F5989_RS04605 (F5989_04670) | tsaB | 947598..948284 (-) | 687 | WP_002272705.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| F5989_RS04610 (F5989_04675) | - | 948295..948753 (-) | 459 | WP_002269503.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| F5989_RS04615 (F5989_04680) | - | 948927..949973 (+) | 1047 | WP_002273658.1 | SDR family oxidoreductase | - |
| F5989_RS04620 (F5989_04685) | - | 949994..950962 (+) | 969 | WP_002289709.1 | aldo/keto reductase | - |
| F5989_RS04625 (F5989_04690) | comR/comR1 | 951335..952237 (+) | 903 | WP_002289708.1 | helix-turn-helix domain-containing protein | Regulator |
| F5989_RS10160 | - | 952953..953099 (-) | 147 | WP_002265758.1 | hypothetical protein | - |
| F5989_RS04630 (F5989_04695) | - | 953099..953284 (-) | 186 | WP_002265759.1 | hypothetical protein | - |
| F5989_RS10165 | - | 953295..953435 (-) | 141 | WP_002265760.1 | hypothetical protein | - |
| F5989_RS10170 | - | 953484..953627 (-) | 144 | WP_002265761.1 | hypothetical protein | - |
| F5989_RS04635 (F5989_04700) | - | 953832..955070 (-) | 1239 | WP_002289707.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| F5989_RS04640 (F5989_04705) | - | 955086..955994 (-) | 909 | WP_002274712.1 | hypothetical protein | - |
| F5989_RS04645 (F5989_04710) | - | 956005..956715 (-) | 711 | WP_002265765.1 | SDR family NAD(P)-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 35021.31 Da Isoelectric Point: 4.5052
>NTDB_id=388832 F5989_RS04625 WP_002289708.1 951335..952237(+) (comR/comR1) [Streptococcus mutans strain NCH105]
MTIKEDLGRRIKAERNRKQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWE
LKGQIVKFPTYADKERLQQKQELIEEIYDKYFDILPEDELLFLDLSENILDSFHEKDIPNIEEIYDDAFEQVLKKETFAF
NDYLYMSYFLQKCGKTADYEQTTFKLLEQKLLKQELTVDELYNIELLIAVMEASGVYALHNDYQNLLPLMKKAQRIIDKA
QLHTYKPPLLELEAKYYVKVVKDKKKAKELYQQALVMGEVLGDPVIIADVKMEMANDGID
MTIKEDLGRRIKAERNRKQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWE
LKGQIVKFPTYADKERLQQKQELIEEIYDKYFDILPEDELLFLDLSENILDSFHEKDIPNIEEIYDDAFEQVLKKETFAF
NDYLYMSYFLQKCGKTADYEQTTFKLLEQKLLKQELTVDELYNIELLIAVMEASGVYALHNDYQNLLPLMKKAQRIIDKA
QLHTYKPPLLELEAKYYVKVVKDKKKAKELYQQALVMGEVLGDPVIIADVKMEMANDGID
Nucleotide
Download Length: 903 bp
>NTDB_id=388832 F5989_RS04625 WP_002289708.1 951335..952237(+) (comR/comR1) [Streptococcus mutans strain NCH105]
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAAAGCCTTTTGTGCGG
AGATGAAACAAAACTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACCCTAGAAAAATTAGAAT
TCATTGCTGATCGCTTAGGAACTAAAATAGCCGACCTGCTGGAAGGCAGCGATATCCAGCTGCCAGATGATTACTGGGAG
CTAAAGGGGCAGATTGTTAAATTTCCCACCTATGCTGATAAGGAAAGACTTCAGCAAAAACAGGAGCTGATCGAAGAAAT
CTATGACAAATACTTTGATATCCTGCCTGAGGATGAACTGCTCTTTTTAGATTTGTCAGAGAATATCCTAGACAGTTTTC
ATGAAAAAGACATTCCTAACATTGAGGAGATTTACGACGATGCCTTTGAGCAAGTCCTCAAAAAGGAGACCTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAAAAGTGCGGAAAAACAGCGGACTATGAGCAGACAACTTTCAAGTTGCT
TGAGCAAAAATTGCTCAAGCAAGAGCTAACAGTAGACGAACTTTATAATATTGAACTTTTGATTGCTGTTATGGAGGCAT
CAGGTGTTTATGCCCTTCATAATGATTACCAGAATCTTCTTCCTTTAATGAAGAAGGCTCAGCGAATTATTGATAAGGCT
CAGCTTCACACCTATAAACCGCCACTTTTAGAACTTGAAGCCAAGTACTATGTCAAGGTTGTCAAGGATAAGAAAAAAGC
TAAGGAACTCTATCAGCAAGCCTTGGTGATGGGCGAAGTTCTAGGTGATCCTGTTATAATTGCAGATGTTAAGATGGAGA
TGGCAAATGATGGGATAGACTAG
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAAAGCCTTTTGTGCGG
AGATGAAACAAAACTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACCCTAGAAAAATTAGAAT
TCATTGCTGATCGCTTAGGAACTAAAATAGCCGACCTGCTGGAAGGCAGCGATATCCAGCTGCCAGATGATTACTGGGAG
CTAAAGGGGCAGATTGTTAAATTTCCCACCTATGCTGATAAGGAAAGACTTCAGCAAAAACAGGAGCTGATCGAAGAAAT
CTATGACAAATACTTTGATATCCTGCCTGAGGATGAACTGCTCTTTTTAGATTTGTCAGAGAATATCCTAGACAGTTTTC
ATGAAAAAGACATTCCTAACATTGAGGAGATTTACGACGATGCCTTTGAGCAAGTCCTCAAAAAGGAGACCTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAAAAGTGCGGAAAAACAGCGGACTATGAGCAGACAACTTTCAAGTTGCT
TGAGCAAAAATTGCTCAAGCAAGAGCTAACAGTAGACGAACTTTATAATATTGAACTTTTGATTGCTGTTATGGAGGCAT
CAGGTGTTTATGCCCTTCATAATGATTACCAGAATCTTCTTCCTTTAATGAAGAAGGCTCAGCGAATTATTGATAAGGCT
CAGCTTCACACCTATAAACCGCCACTTTTAGAACTTGAAGCCAAGTACTATGTCAAGGTTGTCAAGGATAAGAAAAAAGC
TAAGGAACTCTATCAGCAAGCCTTGGTGATGGGCGAAGTTCTAGGTGATCCTGTTATAATTGCAGATGTTAAGATGGAGA
TGGCAAATGATGGGATAGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
75.333 |
100 |
0.753 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
69 |
100 |
0.69 |
| comR | Streptococcus salivarius strain HSISS4 |
42.14 |
99.667 |
0.42 |
| comR | Streptococcus thermophilus LMD-9 |
41.806 |
99.667 |
0.417 |
| comR | Streptococcus thermophilus LMG 18311 |
41.806 |
99.667 |
0.417 |
| comR | Streptococcus salivarius SK126 |
41.137 |
99.667 |
0.41 |