Detailed information NTG0386456

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: F2A31_RS01310
• Genome accession: NZ_CP043909
• Coordinates: 276384..277442 (+)
• Length: 352 a.a.
• NCBI ID: WP_150024850.1
• Uniprot ID: A0A5P1UNX5
• Organism: Acinetobacter suaedae strain C16S1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 271384..282442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F2A31_RS01295 (F2A31_01295)	mraY	271601..272719 (+)	1119	WP_150024847.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
F2A31_RS01300 (F2A31_01300)	-	272782..273600 (+)	819	WP_150024848.1	putative RNA methyltransferase	-
F2A31_RS01305 (F2A31_01305)	ponA	273627..276221 (-)	2595	WP_150024849.1	penicillin-binding protein PBP1a	-
F2A31_RS01310 (F2A31_01310)	comM	276384..277442 (+)	1059	WP_150024850.1	pilus assembly protein PilM	Machinery gene
F2A31_RS01315 (F2A31_01315)	pilN	277442..278086 (+)	645	WP_150024851.1	PilN domain-containing protein	Machinery gene
F2A31_RS01320 (F2A31_01320)	pilO	278083..278793 (+)	711	WP_150024852.1	type 4a pilus biogenesis protein PilO	Machinery gene
F2A31_RS01325 (F2A31_01325)	pilP	278793..279320 (+)	528	WP_150024853.1	pilus assembly protein PilP	Machinery gene
F2A31_RS01330 (F2A31_01330)	pilQ	279382..281514 (+)	2133	WP_171490615.1	type IV pilus secretin PilQ family protein	Machinery gene
F2A31_RS01335 (F2A31_01335)	aroK	281553..282095 (+)	543	WP_150024855.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39107.78 Da
• Isoelectric Point: 4.5407

>NTDB_id=386456 F2A31_RS01310 WP_150024850.1 276384..277442(+) (comM) [Acinetobacter suaedae strain C16S1]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPENSVVEKSILNPEAVGDALERVVNLANPHTSNVAM
AVPTSMVINKIIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLNNPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKTADVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDIQSRYGLSFEE
AGRAKKERTLPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=386456 F2A31_RS01310 WP_150024850.1 276384..277442(+) (comM) [Acinetobacter suaedae strain C16S1]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGGGTCGATATCAGTTCGACAACCGTGAAATTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCCGTGATGCCACTGCCTGAAAATAGTGTGGTGGAAAAAAGCA
TTCTGAACCCAGAAGCAGTTGGTGATGCGCTTGAAAGAGTGGTAAACCTTGCAAATCCGCATACCAGTAATGTCGCGATG
GCAGTTCCAACATCTATGGTCATCAATAAGATTATAGAAATGGATGCTGACATGACGGATGATGAGCGAGAAGTTCAAAT
TCGTATGGATGCTGAGCAATACATTCCGTTCCCATTAGATGAAGTAAGTTTAGACTTTGAAGTTTTGCCTGATCGATTAA
ACAATCCAAATCGGGTAAATGTATTACTTGTTGCAACACGTACCGAAAATGTTGACACCCGTGTTGAAGTACTCGAACTT
GCAGGATTAACTGCTAAAACTGCAGATGTTGAAAGCTATGCAATGGAGCGAGCATTTAGTGTCTTTGCCGATACACTTCC
TATGGGGGCAAATACCGTTGGTATCTTAGATATCGGTCATACCATGACCACATTGTCTGTGATGCAGAAAGGCAAAATTA
TCTACACACGTGAGCAGGTTTTTGGTGGTCGACAGCTAACACAAGATATTCAAAGTCGTTATGGTTTATCTTTTGAAGAA
GCGGGTCGGGCAAAAAAAGAAAGAACGCTTCCAGATGATTATGATATTGAAGTGTTGGAGCCGTTTTTGGATGCTGTAGT
GCAACAGGCAGCACGTTCACTACAATTCTTCTTTTCATCATCTCAATTTAATGAAATTGATCATATCTTGCTTGCTGGCG
GAAATGCGAATATTCCTGGCCTAGCGAAGTTATTACAACAAAAACTCGGTTACCGAGTGACAATTGCCAATCCATTCCTA
CAAATGGGTTTTTCTCCACAAATCGATATTAAAAAAATTGAAAATGATGCGTCCTCATTGATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A5P1UNX5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	88.92	100	0.889
pilM	Acinetobacter baumannii D1279779	88.352	100	0.884
comM	Acinetobacter baylyi ADP1	82.67	100	0.827
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426