Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   FY406_RS02795 Genome accession   NZ_CP043405
Coordinates   592561..593781 (+) Length   406 a.a.
NCBI ID   WP_003090107.1    Uniprot ID   -
Organism   Streptococcus ratti strain ATCC 31377     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 587561..598781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS02780 (FY406_02780) - 590469..591149 (-) 681 WP_037611265.1 YoaK family protein -
  FY406_RS02785 (FY406_02785) - 591182..591856 (-) 675 WP_003091068.1 DNA alkylation repair protein -
  FY406_RS02790 (FY406_02790) rlmH 591865..592344 (-) 480 WP_003090094.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FY406_RS02795 (FY406_02795) htrA 592561..593781 (+) 1221 WP_003090107.1 S1C family serine protease Regulator
  FY406_RS02800 (FY406_02800) spo0J 593963..594739 (+) 777 WP_003090109.1 ParB/RepB/Spo0J family partition protein Regulator
  FY406_RS02805 (FY406_02805) dnaA 594940..596292 (+) 1353 WP_003090112.1 chromosomal replication initiator protein DnaA -
  FY406_RS02810 (FY406_02810) dnaN 596449..597585 (+) 1137 WP_003090114.1 DNA polymerase III subunit beta -
  FY406_RS02815 (FY406_02815) - 597644..598525 (+) 882 WP_003090116.1 diacylglycerol kinase family protein -
  FY406_RS02820 (FY406_02820) - 598537..598728 (+) 192 WP_003090118.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 406 a.a.        Molecular weight: 43226.42 Da        Isoelectric Point: 6.2930

>NTDB_id=383556 FY406_RS02795 WP_003090107.1 592561..593781(+) (htrA) [Streptococcus ratti strain ATCC 31377]
MNNAKSHTFLKWFIPFLLIFLSFILGIVSTAVFYWVSGNKTLSNGGKTTVSNVVYNTKSDTTEAVKDVKNAVVSVINYQK
TDSSYYNDYGDYGDDSQDENNSENGLNVYGEGSGVIYKKDGSSAYLVTNNHVIKDAEKLEIMLANGKKVVGKLVGSDTYS
DLAVVKISSKEVSTVAKFANSDKIKVGEPAIAIGSPLGSDYANSVTQGIVSSLSRTVTSQNENGETISTNAIQTDAAINP
GNSGGALINIKGQVIGINSSKIASSSNSSNGVSVEGMGFAIPSNDVVSIINQLEENGEVIRPALGISMANLSEASTSGRE
SLKLPNDITSGIVVLSTQNGMPADGKLKKYDVITEIDGKKVSSISDLQSTLYKHKKGDTIKITFYRGKDKKTVDIQLTKT
SQDLNN

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=383556 FY406_RS02795 WP_003090107.1 592561..593781(+) (htrA) [Streptococcus ratti strain ATCC 31377]
GTGAATAATGCAAAATCCCATACCTTCCTAAAATGGTTTATCCCTTTTCTGCTTATTTTTTTAAGCTTTATCTTAGGAAT
TGTCTCAACAGCGGTATTTTACTGGGTATCAGGTAACAAAACATTGTCTAACGGTGGAAAAACAACTGTCAGCAATGTGG
TCTATAATACCAAATCTGACACCACTGAAGCTGTTAAAGATGTTAAAAATGCTGTTGTCTCAGTTATTAATTACCAAAAA
ACTGACAGTAGTTATTACAATGACTATGGCGACTATGGAGATGACTCACAAGACGAAAATAATTCAGAAAATGGTTTAAA
TGTTTATGGTGAAGGATCCGGTGTTATCTATAAAAAAGACGGAAGCAGTGCCTATTTGGTAACCAACAACCACGTCATAA
AAGATGCTGAAAAACTGGAAATCATGCTGGCTAACGGGAAAAAAGTTGTCGGAAAATTAGTCGGTTCTGATACCTATTCT
GATTTAGCTGTTGTGAAAATTTCTTCCAAAGAAGTCAGCACTGTTGCTAAATTTGCTAATTCAGATAAGATTAAGGTCGG
CGAACCTGCTATTGCCATCGGTAGCCCTCTGGGAAGCGATTATGCTAATTCAGTAACGCAAGGTATCGTCTCCAGCCTCA
GCCGCACGGTAACCTCACAAAATGAAAATGGCGAAACCATTTCAACCAACGCCATCCAAACCGATGCTGCTATCAATCCT
GGTAATTCCGGCGGAGCTTTAATCAACATCAAAGGACAGGTTATCGGTATCAATTCAAGTAAAATCGCATCGAGCAGCAA
TTCAAGCAACGGGGTTTCTGTTGAAGGAATGGGCTTTGCCATCCCATCAAACGATGTGGTTTCTATCATTAACCAATTAG
AAGAAAACGGTGAAGTTATCAGACCGGCTCTAGGTATTTCAATGGCTAATCTGAGTGAAGCTTCAACCAGCGGCAGAGAG
TCCTTAAAACTTCCAAATGATATTACAAGCGGTATTGTTGTTCTTTCAACTCAAAATGGTATGCCGGCTGATGGTAAGCT
GAAAAAATATGATGTCATCACAGAAATTGATGGCAAAAAAGTGTCTTCCATCAGTGATCTGCAAAGCACTCTTTACAAAC
ATAAAAAAGGTGATACAATTAAAATTACCTTCTACCGCGGCAAAGATAAGAAGACAGTTGATATTCAGCTAACAAAAACA
AGTCAGGATTTAAATAATTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(302-397)

Trypsin-like peptidase domain (Trypsin_2)

(112-257)

Peptidase family M50 (Peptidase_M50)

(21-402)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

85.222

100

0.852
  htrA Streptococcus gordonii str. Challis substr. CH1

56.965

99.015

0.564
  htrA Streptococcus pneumoniae Rx1

53.885

98.276

0.53
  htrA Streptococcus pneumoniae D39

53.885

98.276

0.53
  htrA Streptococcus pneumoniae R6

53.885

98.276

0.53
  htrA Streptococcus pneumoniae TIGR4

53.885

98.276

0.53
  htrA Streptococcus mitis NCTC 12261

53.885

98.276

0.53

Multiple sequence alignment