Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FY406_RS02800 Genome accession   NZ_CP043405
Coordinates   593963..594739 (+) Length   258 a.a.
NCBI ID   WP_003090109.1    Uniprot ID   -
Organism   Streptococcus ratti strain ATCC 31377     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 588963..599739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS02780 (FY406_02780) - 590469..591149 (-) 681 WP_037611265.1 YoaK family protein -
  FY406_RS02785 (FY406_02785) - 591182..591856 (-) 675 WP_003091068.1 DNA alkylation repair protein -
  FY406_RS02790 (FY406_02790) rlmH 591865..592344 (-) 480 WP_003090094.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FY406_RS02795 (FY406_02795) htrA 592561..593781 (+) 1221 WP_003090107.1 S1C family serine protease Regulator
  FY406_RS02800 (FY406_02800) spo0J 593963..594739 (+) 777 WP_003090109.1 ParB/RepB/Spo0J family partition protein Regulator
  FY406_RS02805 (FY406_02805) dnaA 594940..596292 (+) 1353 WP_003090112.1 chromosomal replication initiator protein DnaA -
  FY406_RS02810 (FY406_02810) dnaN 596449..597585 (+) 1137 WP_003090114.1 DNA polymerase III subunit beta -
  FY406_RS02815 (FY406_02815) - 597644..598525 (+) 882 WP_003090116.1 diacylglycerol kinase family protein -
  FY406_RS02820 (FY406_02820) - 598537..598728 (+) 192 WP_003090118.1 DUF951 domain-containing protein -
  FY406_RS02825 (FY406_02825) - 598822..599172 (+) 351 WP_003090120.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29764.52 Da        Isoelectric Point: 10.0057

>NTDB_id=383557 FY406_RS02800 WP_003090109.1 593963..594739(+) (spo0J) [Streptococcus ratti strain ATCC 31377]
MPEELKYLDPKDINPNPYQPRLHFEPKELKELTQSIKENGLIQPIIVRKSDIFGYDLIAGERRLKAVKMAGLDKIPVIIK
DVSDKDSMKQAIIENLQRSDLNPIEEAKAYQNLIIKSQMTHDDIAKAIGKSRPYITNSIRLLNLPADIKQALEKGVISQG
HARLLLSINKQELQNSWFHKILDEQLSVRQLERALKNLSKKENKKKPPKDIFISEKEKEISQLLGLPVSIHYNKQNQGQL
KISFTSEEEFNRIMNRLN

Nucleotide


Download         Length: 777 bp        

>NTDB_id=383557 FY406_RS02800 WP_003090109.1 593963..594739(+) (spo0J) [Streptococcus ratti strain ATCC 31377]
ATGCCTGAAGAACTAAAATACCTTGACCCCAAAGATATTAATCCCAATCCTTATCAGCCAAGACTTCATTTTGAGCCTAA
AGAACTGAAAGAGCTGACACAGTCCATTAAAGAAAATGGACTGATTCAGCCTATTATTGTCAGAAAGTCAGATATTTTCG
GTTACGATTTAATTGCAGGAGAGCGGCGGTTAAAAGCGGTTAAGATGGCTGGATTAGATAAGATTCCTGTCATTATCAAA
GATGTTTCCGACAAAGACAGTATGAAGCAGGCTATTATTGAAAATTTACAGCGTTCCGATCTTAATCCGATTGAAGAGGC
TAAGGCCTATCAAAATCTTATCATCAAAAGTCAAATGACTCATGATGATATCGCAAAAGCCATCGGAAAATCCAGGCCTT
ATATTACTAACAGCATCAGACTCCTAAATCTGCCAGCTGACATCAAACAAGCCCTTGAAAAGGGAGTAATTTCTCAGGGA
CACGCGCGCCTGCTCTTAAGCATTAATAAGCAAGAGCTGCAGAATAGTTGGTTTCATAAAATTCTTGATGAACAGCTCAG
TGTCCGCCAGCTTGAAAGAGCTTTGAAAAATCTGTCCAAAAAAGAAAACAAGAAAAAACCGCCAAAAGATATTTTCATTT
CAGAAAAAGAAAAAGAAATCAGCCAGCTTCTGGGTCTGCCTGTTTCCATTCACTACAATAAACAGAACCAGGGACAGCTG
AAAATTTCCTTTACATCTGAAGAAGAATTCAACAGAATAATGAACAGGCTTAATTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

80.233

100

0.802

Multiple sequence alignment