Detailed information NTG0382000

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: FYA21_RS02395
• Genome accession: NZ_CP043180
• Coordinates: 480631..481689 (-)
• Length: 352 a.a.
• NCBI ID: WP_213062576.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain PG20180064
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 475631..486689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYA21_RS02370 (FYA21_02370)	aroK	475906..476475 (-)	570	WP_000643712.1	shikimate kinase AroK	-
FYA21_RS02375 (FYA21_02375)	pilQ	476487..478652 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
FYA21_RS02380 (FYA21_02380)	pilP	478715..479242 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
FYA21_RS02385 (FYA21_02385)	pilO	479253..479993 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
FYA21_RS02390 (FYA21_02390)	pilN	479990..480631 (-)	642	WP_000201224.1	PilN domain-containing protein	Machinery gene
FYA21_RS02395 (FYA21_02395)	pilM	480631..481689 (-)	1059	WP_213062576.1	pilus assembly protein PilM	Machinery gene
FYA21_RS02400 (FYA21_02400)	ponA	481851..484406 (+)	2556	WP_141395034.1	penicillin-binding protein PBP1a	-
FYA21_RS02405 (FYA21_02405)	-	484424..485248 (-)	825	WP_001990541.1	putative RNA methyltransferase	-
FYA21_RS02410 (FYA21_02410)	-	485251..485583 (-)	333	WP_000169598.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39048.63 Da
• Isoelectric Point: 4.4618

>NTDB_id=382000 FYA21_RS02395 WP_213062576.1 480631..481689(-) (pilM) [Acinetobacter baumannii strain PG20180064]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNLEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=382000 FYA21_RS02395 WP_213062576.1 480631..481689(-) (pilM) [Acinetobacter baumannii strain PG20180064]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCTAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423