Detailed information NTG0380026

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: FRD49_RS01655
• Genome accession: NZ_CP042994
• Coordinates: 348551..349609 (+)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: A0AAV3IQ41
• Organism: Acinetobacter nosocomialis strain J1A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 343551..354609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRD49_RS01640 (FRD49_01640)	-	344653..344985 (+)	333	WP_002051722.1	hypothetical protein	-
FRD49_RS01645 (FRD49_01645)	-	344988..345812 (+)	825	WP_148356603.1	putative RNA methyltransferase	-
FRD49_RS01650 (FRD49_01650)	ponA	345830..348388 (-)	2559	WP_148356604.1	penicillin-binding protein PBP1a	-
FRD49_RS01655 (FRD49_01655)	comM	348551..349609 (+)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
FRD49_RS01660 (FRD49_01660)	pilN	349609..350253 (+)	645	WP_006581060.1	PilN domain-containing protein	Machinery gene
FRD49_RS01665 (FRD49_01665)	pilO	350250..350990 (+)	741	WP_148356605.1	type 4a pilus biogenesis protein PilO	Machinery gene
FRD49_RS01670 (FRD49_01670)	pilP	351001..351528 (+)	528	WP_006582542.1	pilus assembly protein PilP	Machinery gene
FRD49_RS01675 (FRD49_01675)	pilQ	351591..353756 (+)	2166	WP_148356606.1	type IV pilus secretin PilQ	Machinery gene
FRD49_RS01680 (FRD49_01680)	aroK	353768..354337 (+)	570	WP_002051689.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=380026 FRD49_RS01655 WP_004711654.1 348551..349609(+) (comM) [Acinetobacter nosocomialis strain J1A]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=380026 FRD49_RS01655 WP_004711654.1 348551..349609(+) (comM) [Acinetobacter nosocomialis strain J1A]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGTGGTAAGCAACTTACGCTCGAAATTCAAAGTCGTTATGGCCTCTCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGCACTTTGCCAGATGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTTTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATCGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426