Detailed information NTG0376535

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: FQV73_RS06930
• Genome accession: NZ_CP042271
• Coordinates: 1498964..1499578 (-)
• Length: 204 a.a.
• NCBI ID: WP_043867297.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LPL061
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1493964..1504578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQV73_RS06900	rpsT	1494264..1494530 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
FQV73_RS06905	holA	1494547..1495588 (-)	1042	Protein_1382	DNA polymerase III subunit delta	-
FQV73_RS06910	-	1495628..1495782 (-)	155	Protein_1383	hypothetical protein	-
FQV73_RS06915	-	1495823..1495957 (+)	135	WP_003152870.1	YqzM family protein	-
FQV73_RS06920	comEC	1495976..1498327 (-)	2352	WP_043867296.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FQV73_RS06925	-	1498328..1498897 (-)	570	WP_003152868.1	ComE operon protein 2	-
FQV73_RS06930	comEA	1498964..1499578 (-)	615	WP_043867297.1	helix-hairpin-helix domain-containing protein	Machinery gene
FQV73_RS06935	comER	1499637..1500458 (+)	822	WP_043867298.1	late competence protein ComER	-
FQV73_RS06940	-	1500527..1501264 (-)	738	WP_014305450.1	class I SAM-dependent methyltransferase	-
FQV73_RS06945	rsfS	1501261..1501617 (-)	357	WP_003152864.1	ribosome silencing factor	-
FQV73_RS06950	yqeK	1501614..1502195 (-)	582	WP_003152863.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
FQV73_RS06955	-	1502185..1502754 (-)	570	WP_003152860.1	nicotinate-nucleotide adenylyltransferase	-
FQV73_RS06960	yhbY	1502765..1503055 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
FQV73_RS06965	aroE	1503049..1503891 (-)	843	WP_003152856.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22178.37 Da
• Isoelectric Point: 6.9685

>NTDB_id=376535 FQV73_RS06930 WP_043867297.1 1498964..1499578(-) (comEA) [Bacillus velezensis strain LPL061]
MTKAMMTERMRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEGNHPKTAVGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMKVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=376535 FQV73_RS06930 WP_043867297.1 1498964..1499578(-) (comEA) [Bacillus velezensis strain LPL061]
ATGACGAAAGCGATGATGACGGAGCGGATGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGTCAAACAGCCTCCGCAT
CCGTCGCGGACAAAAAAGACACCGCAGACGATAAGATTATGATTGATGTGAAAGGAGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGGGAATCATCCGAAAACAG
CAGTTGGTGAAAAGGAAAATGCAGCTGTCAATATCAATACGGCATCTTTGGACGAACTTCAGGCAATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCCATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAAGGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	36.019	100	0.373
comEA/celA/cilE	Streptococcus mitis SK321	35.545	100	0.368
comEA	Latilactobacillus sakei subsp. sakei 23K	31.897	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae R6	35.749	100	0.363
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.749	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae D39	35.749	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.749	100	0.363