Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | HMPREF0837_RS00240 | Genome accession | NC_014251 |
| Coordinates | 38027..38329 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413380.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae TCH8431/19A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 33027..43329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HMPREF0837_RS00210 (HMPREF0837_10038) | rnpA | 33713..34084 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| HMPREF0837_RS13140 (HMPREF0837_10039) | - | 34101..34232 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| HMPREF0837_RS00215 (HMPREF0837_10040) | - | 34233..35423 (-) | 1191 | WP_000167766.1 | acetate kinase | - |
| HMPREF0837_RS00220 (HMPREF0837_10041) | comYH | 35474..36427 (-) | 954 | WP_000345119.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HMPREF0837_RS00225 (HMPREF0837_10042) | - | 36488..37075 (-) | 588 | WP_000679774.1 | class I SAM-dependent methyltransferase | - |
| HMPREF0837_RS00230 (HMPREF0837_10043) | comGG/cglG | 37212..37625 (-) | 414 | WP_000265630.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| HMPREF0837_RS00235 (HMPREF0837_10044) | comGF/cglF | 37603..38064 (-) | 462 | WP_000250545.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HMPREF0837_RS00240 (HMPREF0837_10045) | comGE/cglE | 38027..38329 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| HMPREF0837_RS00245 (HMPREF0837_10046) | comGD/cglD | 38292..38696 (-) | 405 | WP_000588005.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HMPREF0837_RS00250 (HMPREF0837_10047) | comGC/cglC | 38689..39015 (-) | 327 | WP_000738650.1 | comG operon protein ComGC | Machinery gene |
| HMPREF0837_RS00255 (HMPREF0837_10048) | comGB/cglB | 39017..40033 (-) | 1017 | WP_013193332.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HMPREF0837_RS00260 (HMPREF0837_10049) | comGA/cglA/cilD | 39981..40922 (-) | 942 | WP_000249567.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HMPREF0837_RS00265 (HMPREF0837_10050) | - | 40998..41363 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| HMPREF0837_RS00270 (HMPREF0837_10051) | - | 41514..42572 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11135.11 Da Isoelectric Point: 9.7273
>NTDB_id=37574 HMPREF0837_RS00240 WP_000413380.1 38027..38329(-) (comGE/cglE) [Streptococcus pneumoniae TCH8431/19A]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=37574 HMPREF0837_RS00240 WP_000413380.1 38027..38329(-) (comGE/cglE) [Streptococcus pneumoniae TCH8431/19A]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus mitis NCTC 12261 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae D39 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae R6 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
43.333 |
90 |
0.39 |
| comYE | Streptococcus mutans UA159 |
43.333 |
90 |
0.39 |