Detailed information NTG0037575

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: HMPREF0837_RS00245
• Genome accession: NC_014251
• Coordinates: 38292..38696 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588005.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae TCH8431/19A
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 33292..43696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF0837_RS00210 (HMPREF0837_10038)	rnpA	33713..34084 (-)	372	WP_000739246.1	ribonuclease P protein component	-
HMPREF0837_RS13140 (HMPREF0837_10039)	-	34101..34232 (-)	132	WP_000768904.1	hypothetical protein	-
HMPREF0837_RS00215 (HMPREF0837_10040)	-	34233..35423 (-)	1191	WP_000167766.1	acetate kinase	-
HMPREF0837_RS00220 (HMPREF0837_10041)	comYH	35474..36427 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
HMPREF0837_RS00225 (HMPREF0837_10042)	-	36488..37075 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
HMPREF0837_RS00230 (HMPREF0837_10043)	comGG/cglG	37212..37625 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
HMPREF0837_RS00235 (HMPREF0837_10044)	comGF/cglF	37603..38064 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
HMPREF0837_RS00240 (HMPREF0837_10045)	comGE/cglE	38027..38329 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
HMPREF0837_RS00245 (HMPREF0837_10046)	comGD/cglD	38292..38696 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
HMPREF0837_RS00250 (HMPREF0837_10047)	comGC/cglC	38689..39015 (-)	327	WP_000738650.1	comG operon protein ComGC	Machinery gene
HMPREF0837_RS00255 (HMPREF0837_10048)	comGB/cglB	39017..40033 (-)	1017	WP_013193332.1	competence type IV pilus assembly protein ComGB	Machinery gene
HMPREF0837_RS00260 (HMPREF0837_10049)	comGA/cglA/cilD	39981..40922 (-)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
HMPREF0837_RS00265 (HMPREF0837_10050)	-	40998..41363 (-)	366	WP_000286415.1	DUF1033 family protein	-
HMPREF0837_RS00270 (HMPREF0837_10051)	-	41514..42572 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=37575 HMPREF0837_RS00245 WP_000588005.1 38292..38696(-) (comGD/cglD) [Streptococcus pneumoniae TCH8431/19A]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=37575 HMPREF0837_RS00245 WP_000588005.1 38292..38696(-) (comGD/cglD) [Streptococcus pneumoniae TCH8431/19A]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478