Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | FOY61_RS25805 | Genome accession | NZ_CP041771 |
| Coordinates | 5361853..5362389 (-) | Length | 178 a.a. |
| NCBI ID | WP_143978162.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain A681 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5356853..5367389
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOY61_RS25785 (FOY61_25785) | - | 5357428..5359683 (-) | 2256 | WP_003104913.1 | DUF1631 domain-containing protein | - |
| FOY61_RS25790 (FOY61_25790) | nadC | 5359969..5360817 (+) | 849 | WP_017148538.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| FOY61_RS25800 (FOY61_25800) | tfpZ | 5361051..5361788 (-) | 738 | WP_023110409.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| FOY61_RS25805 (FOY61_25805) | pilE | 5361853..5362389 (-) | 537 | WP_143978162.1 | pilin | Machinery gene |
| FOY61_RS25810 (FOY61_25810) | pilB | 5362616..5364319 (+) | 1704 | WP_023100230.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| FOY61_RS25815 (FOY61_25815) | pilC | 5364323..5365540 (+) | 1218 | WP_023103506.1 | type II secretion system F family protein | Machinery gene |
| FOY61_RS25820 (FOY61_25820) | pilD | 5365543..5366415 (+) | 873 | WP_017148550.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| FOY61_RS25825 (FOY61_25825) | coaE | 5366412..5367023 (+) | 612 | WP_003094654.1 | dephospho-CoA kinase | - |
| FOY61_RS25830 (FOY61_25830) | yacG | 5367020..5367220 (+) | 201 | WP_017148551.1 | DNA gyrase inhibitor YacG | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18391.94 Da Isoelectric Point: 6.2458
>NTDB_id=374086 FOY61_RS25805 WP_143978162.1 5361853..5362389(-) (pilE) [Pseudomonas aeruginosa strain A681]
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTVRTRVSEGLVLAEPAKLMISTDGSASTADLTRATTTWNQQSNNLGA
SSKYVTSVLMDAGNTGVITIRYVAEQVGLPTAGNTLILSPYINDGNTRTALATAVAAGTRGTIDWACTSASNATATAQGF
TGMAAGSVPQEFAPAQCR
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTVRTRVSEGLVLAEPAKLMISTDGSASTADLTRATTTWNQQSNNLGA
SSKYVTSVLMDAGNTGVITIRYVAEQVGLPTAGNTLILSPYINDGNTRTALATAVAAGTRGTIDWACTSASNATATAQGF
TGMAAGSVPQEFAPAQCR
Nucleotide
Download Length: 537 bp
>NTDB_id=374086 FOY61_RS25805 WP_143978162.1 5361853..5362389(-) (pilE) [Pseudomonas aeruginosa strain A681]
ATGAAAGCTCAAAAAGGCTTCACTTTGATCGAGCTGATGATCGTTGTAGCGATCATCGGTATTCTGGCTGCGATTGCTCT
GCCGGCCTATCAGGACTACACCGTTCGTACCCGTGTCAGTGAAGGTCTGGTTCTGGCTGAGCCCGCCAAACTGATGATCT
CCACGGATGGAAGTGCTTCTACTGCTGATCTGACTCGCGCAACCACTACTTGGAACCAGCAATCCAATAATCTGGGTGCA
TCCAGTAAGTACGTAACATCTGTTTTGATGGATGCTGGTAACACCGGTGTTATCACTATTAGGTATGTCGCTGAGCAAGT
GGGCTTGCCGACTGCCGGTAACACTCTGATTCTGTCTCCCTATATCAATGATGGTAACACTCGCACTGCTCTGGCGACTG
CAGTGGCTGCTGGCACTCGTGGCACCATTGATTGGGCTTGCACTTCGGCATCGAACGCGACTGCCACTGCTCAGGGTTTC
ACCGGCATGGCAGCTGGTAGTGTGCCGCAAGAGTTTGCTCCTGCTCAGTGCCGCTAA
ATGAAAGCTCAAAAAGGCTTCACTTTGATCGAGCTGATGATCGTTGTAGCGATCATCGGTATTCTGGCTGCGATTGCTCT
GCCGGCCTATCAGGACTACACCGTTCGTACCCGTGTCAGTGAAGGTCTGGTTCTGGCTGAGCCCGCCAAACTGATGATCT
CCACGGATGGAAGTGCTTCTACTGCTGATCTGACTCGCGCAACCACTACTTGGAACCAGCAATCCAATAATCTGGGTGCA
TCCAGTAAGTACGTAACATCTGTTTTGATGGATGCTGGTAACACCGGTGTTATCACTATTAGGTATGTCGCTGAGCAAGT
GGGCTTGCCGACTGCCGGTAACACTCTGATTCTGTCTCCCTATATCAATGATGGTAACACTCGCACTGCTCTGGCGACTG
CAGTGGCTGCTGGCACTCGTGGCACCATTGATTGGGCTTGCACTTCGGCATCGAACGCGACTGCCACTGCTCAGGGTTTC
ACCGGCATGGCAGCTGGTAGTGTGCCGCAAGAGTTTGCTCCTGCTCAGTGCCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
44.221 |
100 |
0.494 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40 |
100 |
0.404 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.773 |
98.876 |
0.393 |
| pilA2 | Legionella pneumophila str. Paris |
39.205 |
98.876 |
0.388 |