Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | FNU76_RS05815 | Genome accession | NZ_CP041730 |
| Coordinates | 1311245..1312381 (+) | Length | 378 a.a. |
| NCBI ID | WP_143856829.1 | Uniprot ID | A0A516SCN1 |
| Organism | Chitinimonas arctica strain R3-44 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1306245..1317381
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNU76_RS05785 (FNU76_05785) | - | 1306674..1306979 (-) | 306 | WP_143856823.1 | DUF167 family protein | - |
| FNU76_RS05790 (FNU76_05790) | - | 1306986..1307570 (-) | 585 | WP_143856824.1 | YggT family protein | - |
| FNU76_RS05795 (FNU76_05795) | proC | 1307626..1308453 (-) | 828 | WP_143856825.1 | pyrroline-5-carboxylate reductase | - |
| FNU76_RS05800 (FNU76_05800) | - | 1308450..1309019 (-) | 570 | WP_143856826.1 | hypothetical protein | - |
| FNU76_RS05805 (FNU76_05805) | - | 1309016..1309738 (-) | 723 | WP_143856827.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| FNU76_RS05810 (FNU76_05810) | pilT | 1310163..1311203 (+) | 1041 | WP_143856828.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FNU76_RS05815 (FNU76_05815) | pilU | 1311245..1312381 (+) | 1137 | WP_143856829.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| FNU76_RS05820 (FNU76_05820) | - | 1312415..1313920 (-) | 1506 | WP_179958366.1 | mechanosensitive ion channel family protein | - |
| FNU76_RS05825 (FNU76_05825) | - | 1314021..1315289 (+) | 1269 | WP_143856831.1 | EAL and HDOD domain-containing protein | - |
| FNU76_RS05830 (FNU76_05830) | - | 1315345..1316535 (-) | 1191 | WP_143856832.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 42365.56 Da Isoelectric Point: 6.5041
>NTDB_id=373587 FNU76_RS05815 WP_143856829.1 1311245..1312381(+) (pilU) [Chitinimonas arctica strain R3-44]
MEKEQATKFMHDLLRLMRQKNASDLFITADFPPAMKIDGKMTPVSSQQLSSQHTKELCRSVMNDRQAEEFEATKECNFAI
SPGGIGRFRCNAFQQQGRIGLVLRTITTEIPKFDELGLPPVLKDVALAKRGLVIFVGGTGSGKSTSLAAMIGFRNENSYG
HIITIEDPVEYVHEHRNCIVTQREIGVDTDSWHNALRNTLRQAPDVILIGEIRDRETMDYAVAFAETGHLCMATLHANSA
NQALDRIINFFPEERRAQLLMDLSLNLKAFISQRLIPLRTGKGRAAAVEVMLNSPLISDLIFKGDVHEIKEIMSKSRELG
MQTFDQALFDLYEDGKISYEDGLRNADSVNDLRLKIKLQSKESKGRDAMAGLDHLDIV
MEKEQATKFMHDLLRLMRQKNASDLFITADFPPAMKIDGKMTPVSSQQLSSQHTKELCRSVMNDRQAEEFEATKECNFAI
SPGGIGRFRCNAFQQQGRIGLVLRTITTEIPKFDELGLPPVLKDVALAKRGLVIFVGGTGSGKSTSLAAMIGFRNENSYG
HIITIEDPVEYVHEHRNCIVTQREIGVDTDSWHNALRNTLRQAPDVILIGEIRDRETMDYAVAFAETGHLCMATLHANSA
NQALDRIINFFPEERRAQLLMDLSLNLKAFISQRLIPLRTGKGRAAAVEVMLNSPLISDLIFKGDVHEIKEIMSKSRELG
MQTFDQALFDLYEDGKISYEDGLRNADSVNDLRLKIKLQSKESKGRDAMAGLDHLDIV
Nucleotide
Download Length: 1137 bp
>NTDB_id=373587 FNU76_RS05815 WP_143856829.1 1311245..1312381(+) (pilU) [Chitinimonas arctica strain R3-44]
ATGGAAAAGGAACAAGCCACCAAGTTCATGCACGATCTGCTGCGCCTGATGCGGCAGAAGAATGCATCGGACCTGTTTAT
CACCGCCGATTTTCCGCCGGCGATGAAGATCGACGGCAAGATGACGCCGGTGTCCAGCCAGCAACTCAGCAGCCAGCACA
CCAAGGAATTGTGCCGCTCGGTCATGAACGACCGCCAGGCGGAAGAGTTCGAGGCCACCAAGGAATGTAATTTCGCCATC
AGCCCCGGCGGCATCGGCCGCTTCCGCTGCAATGCCTTCCAGCAGCAGGGCCGCATCGGCCTGGTACTGCGGACCATCAC
CACCGAAATCCCCAAGTTCGACGAACTGGGATTGCCACCGGTGCTGAAGGACGTGGCACTGGCCAAGCGTGGCCTGGTGA
TCTTCGTCGGCGGTACCGGCTCCGGCAAATCGACCTCGCTGGCCGCCATGATCGGCTTTCGCAACGAGAACAGCTACGGC
CATATCATCACCATCGAAGACCCGGTGGAGTATGTGCATGAGCACCGCAACTGCATCGTCACCCAGCGTGAAATCGGGGT
GGATACCGATAGCTGGCACAACGCCCTGCGCAATACCTTGCGGCAGGCGCCGGACGTCATCCTGATCGGCGAAATCCGTG
ATCGCGAAACGATGGACTACGCCGTCGCCTTCGCCGAAACCGGCCACCTGTGCATGGCTACCCTGCACGCCAACTCGGCC
AACCAGGCGCTGGACCGTATCATCAACTTCTTCCCGGAAGAACGCCGCGCCCAGCTGCTGATGGACTTGTCGCTGAACCT
GAAGGCCTTTATCTCGCAACGGCTGATTCCCCTGCGTACCGGCAAGGGCCGGGCGGCAGCGGTGGAAGTGATGCTCAATT
CCCCGCTGATTTCCGACCTGATCTTCAAGGGCGATGTGCATGAGATCAAGGAGATCATGAGCAAGAGCCGCGAGCTGGGC
ATGCAGACATTCGACCAGGCGCTGTTCGATCTGTACGAAGACGGCAAGATCAGCTACGAGGATGGCCTGCGCAATGCCGA
CTCGGTGAACGACCTGCGGCTGAAGATCAAGCTGCAGTCGAAGGAATCCAAGGGCCGGGACGCGATGGCAGGCCTGGATC
ACCTCGATATCGTATGA
ATGGAAAAGGAACAAGCCACCAAGTTCATGCACGATCTGCTGCGCCTGATGCGGCAGAAGAATGCATCGGACCTGTTTAT
CACCGCCGATTTTCCGCCGGCGATGAAGATCGACGGCAAGATGACGCCGGTGTCCAGCCAGCAACTCAGCAGCCAGCACA
CCAAGGAATTGTGCCGCTCGGTCATGAACGACCGCCAGGCGGAAGAGTTCGAGGCCACCAAGGAATGTAATTTCGCCATC
AGCCCCGGCGGCATCGGCCGCTTCCGCTGCAATGCCTTCCAGCAGCAGGGCCGCATCGGCCTGGTACTGCGGACCATCAC
CACCGAAATCCCCAAGTTCGACGAACTGGGATTGCCACCGGTGCTGAAGGACGTGGCACTGGCCAAGCGTGGCCTGGTGA
TCTTCGTCGGCGGTACCGGCTCCGGCAAATCGACCTCGCTGGCCGCCATGATCGGCTTTCGCAACGAGAACAGCTACGGC
CATATCATCACCATCGAAGACCCGGTGGAGTATGTGCATGAGCACCGCAACTGCATCGTCACCCAGCGTGAAATCGGGGT
GGATACCGATAGCTGGCACAACGCCCTGCGCAATACCTTGCGGCAGGCGCCGGACGTCATCCTGATCGGCGAAATCCGTG
ATCGCGAAACGATGGACTACGCCGTCGCCTTCGCCGAAACCGGCCACCTGTGCATGGCTACCCTGCACGCCAACTCGGCC
AACCAGGCGCTGGACCGTATCATCAACTTCTTCCCGGAAGAACGCCGCGCCCAGCTGCTGATGGACTTGTCGCTGAACCT
GAAGGCCTTTATCTCGCAACGGCTGATTCCCCTGCGTACCGGCAAGGGCCGGGCGGCAGCGGTGGAAGTGATGCTCAATT
CCCCGCTGATTTCCGACCTGATCTTCAAGGGCGATGTGCATGAGATCAAGGAGATCATGAGCAAGAGCCGCGAGCTGGGC
ATGCAGACATTCGACCAGGCGCTGTTCGATCTGTACGAAGACGGCAAGATCAGCTACGAGGATGGCCTGCGCAATGCCGA
CTCGGTGAACGACCTGCGGCTGAAGATCAAGCTGCAGTCGAAGGAATCCAAGGGCCGGGACGCGATGGCAGGCCTGGATC
ACCTCGATATCGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
65.33 |
92.328 |
0.603 |
| pilU | Acinetobacter baylyi ADP1 |
60.224 |
94.444 |
0.569 |
| pilU | Vibrio cholerae strain A1552 |
54.958 |
93.386 |
0.513 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.373 |
88.624 |
0.402 |
| pilT | Pseudomonas aeruginosa PAK |
42.388 |
88.624 |
0.376 |