Detailed information
Bioinformatically predicted
Overview
| Name | comM | Type | Machinery gene |
| Locus tag | FNT16_RS05130 | Genome accession | NZ_CP041660 |
| Coordinates | 1311695..1313215 (+) | Length | 506 a.a. |
| NCBI ID | WP_143870529.1 | Uniprot ID | - |
| Organism | Catenovulum sediminis strain WS1-A | ||
| Function | require for natural transformation (predicted from homology) Unclear |
||
Genomic Context
Location: 1306695..1318215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNT16_RS05115 | - | 1307116..1309458 (-) | 2343 | WP_143870526.1 | MMPL family transporter | - |
| FNT16_RS05120 | - | 1309484..1310266 (-) | 783 | WP_143870527.1 | TetR/AcrR family transcriptional regulator | - |
| FNT16_RS05125 | - | 1310380..1311348 (-) | 969 | WP_143870528.1 | GTP-binding protein | - |
| FNT16_RS05130 | comM | 1311695..1313215 (+) | 1521 | WP_143870529.1 | YifB family Mg chelatase-like AAA ATPase | Machinery gene |
| FNT16_RS05135 | - | 1313265..1314437 (+) | 1173 | WP_143870530.1 | FAD-dependent monooxygenase | - |
| FNT16_RS05140 | - | 1314430..1314861 (+) | 432 | WP_185976699.1 | lysozyme inhibitor LprI family protein | - |
| FNT16_RS05145 | - | 1314854..1315831 (+) | 978 | WP_143870532.1 | sulfite exporter TauE/SafE family protein | - |
Sequence
Protein
Download Length: 506 a.a. Molecular weight: 55438.61 Da Isoelectric Point: 7.4524
>NTDB_id=372829 FNT16_RS05130 WP_143870529.1 1311695..1313215(+) (comM) [Catenovulum sediminis strain WS1-A]
MPLAIVYSRARIAIDAPLVTVEVHLSNGLPAFGIVGLPETSVKEARDRVRSAIINSEFEFPDKRITVNLAPADLPKEGGR
FDLAIAVGILAASGQIPLDALQNYEFVAELALSGDLRPIIGEIPFTIACHGQKRAAVMTHKNASIAAHINQAKVYAATNL
RAVQQHLAGEKSLPPAEKSQTDDSHYEKMLDMTDVIGQTHAKKALEIAAAGGHHMLMLGPPGTGKTMLAERLPSILPEMN
EQEAITTAAIHSISGKNAALENWQVRPFRHPHHTCSAVALVGGSSNPKPGEISLAHNGVLFLDELPEFDRKVIDVLREPL
ESGMVTISRAARQVDFPAKFQLIAALNPSPCGHYNDEQMRSTPEQMLRYLNKLSGPFLDRIDIQIEVARLPKGSLTQKND
RGETSKVIRQRVVEARNRQFARQDKLNCDLSNKELEAVAGIDKADADFLETAIEKLDLSIRAFHRLLKVARTIADLNAQA
NVDRTHLAQALGYRAMDRLLRSLHNI
MPLAIVYSRARIAIDAPLVTVEVHLSNGLPAFGIVGLPETSVKEARDRVRSAIINSEFEFPDKRITVNLAPADLPKEGGR
FDLAIAVGILAASGQIPLDALQNYEFVAELALSGDLRPIIGEIPFTIACHGQKRAAVMTHKNASIAAHINQAKVYAATNL
RAVQQHLAGEKSLPPAEKSQTDDSHYEKMLDMTDVIGQTHAKKALEIAAAGGHHMLMLGPPGTGKTMLAERLPSILPEMN
EQEAITTAAIHSISGKNAALENWQVRPFRHPHHTCSAVALVGGSSNPKPGEISLAHNGVLFLDELPEFDRKVIDVLREPL
ESGMVTISRAARQVDFPAKFQLIAALNPSPCGHYNDEQMRSTPEQMLRYLNKLSGPFLDRIDIQIEVARLPKGSLTQKND
RGETSKVIRQRVVEARNRQFARQDKLNCDLSNKELEAVAGIDKADADFLETAIEKLDLSIRAFHRLLKVARTIADLNAQA
NVDRTHLAQALGYRAMDRLLRSLHNI
Nucleotide
Download Length: 1521 bp
>NTDB_id=372829 FNT16_RS05130 WP_143870529.1 1311695..1313215(+) (comM) [Catenovulum sediminis strain WS1-A]
ATGCCTTTAGCAATCGTTTATAGCCGAGCAAGAATAGCCATTGATGCACCACTGGTCACAGTAGAGGTGCATTTATCTAA
CGGACTACCTGCATTTGGTATCGTCGGACTCCCAGAAACTTCGGTAAAAGAAGCGAGAGACCGCGTACGCAGCGCGATCA
TCAACAGTGAATTTGAATTTCCCGACAAACGTATCACGGTCAATCTTGCCCCTGCCGACTTACCGAAAGAAGGCGGCCGT
TTCGATTTAGCAATTGCAGTTGGGATATTGGCAGCCAGTGGACAAATTCCCTTAGATGCATTGCAGAATTATGAATTTGT
TGCCGAACTCGCCTTATCTGGTGATTTAAGACCAATTATTGGTGAAATCCCATTTACCATAGCCTGCCACGGCCAAAAAC
GAGCAGCCGTCATGACTCACAAGAACGCCAGTATTGCTGCACATATTAATCAAGCAAAAGTTTACGCAGCGACAAACCTG
CGCGCTGTGCAACAACACCTAGCGGGTGAAAAATCTTTACCACCCGCCGAGAAAAGTCAAACAGACGACTCACATTACGA
AAAAATGCTGGATATGACCGACGTTATTGGCCAGACGCACGCTAAAAAAGCACTCGAAATAGCGGCCGCTGGCGGACATC
ACATGCTGATGCTTGGTCCACCCGGCACGGGTAAAACCATGCTAGCGGAACGATTGCCGAGTATTTTGCCAGAAATGAAT
GAACAAGAAGCAATAACCACAGCGGCAATTCATTCAATCAGCGGCAAAAACGCAGCGCTAGAAAACTGGCAAGTACGCCC
GTTTCGTCATCCCCATCATACCTGTTCAGCAGTTGCTTTAGTGGGGGGCTCAAGTAACCCGAAACCGGGTGAAATCTCAT
TGGCCCACAATGGTGTATTATTTTTAGATGAACTTCCCGAGTTTGACCGCAAAGTCATCGATGTACTGCGCGAACCGCTA
GAATCAGGTATGGTAACCATTAGCCGTGCGGCCAGACAGGTAGATTTTCCAGCAAAATTTCAGCTGATAGCGGCACTCAA
CCCATCCCCATGTGGACATTACAATGATGAGCAAATGCGCTCAACGCCAGAACAGATGTTGCGTTATTTAAATAAACTGT
CCGGACCATTTTTAGACCGCATTGATATTCAAATTGAAGTTGCCCGTTTACCCAAAGGCAGTTTGACACAAAAAAATGAC
CGAGGTGAAACCTCCAAGGTCATTCGCCAACGGGTCGTTGAGGCCCGAAATCGACAATTTGCACGACAAGATAAATTAAA
TTGTGATCTATCAAACAAGGAATTAGAAGCGGTAGCGGGAATAGACAAAGCGGATGCAGACTTTTTAGAAACCGCAATCG
AAAAACTCGACCTATCCATTCGTGCTTTTCATCGACTCTTAAAAGTTGCGCGCACAATTGCTGATTTAAATGCACAAGCT
AATGTAGACCGCACACATTTAGCGCAAGCGCTTGGCTACAGAGCCATGGACAGATTATTAAGGAGTTTACATAACATCTG
A
ATGCCTTTAGCAATCGTTTATAGCCGAGCAAGAATAGCCATTGATGCACCACTGGTCACAGTAGAGGTGCATTTATCTAA
CGGACTACCTGCATTTGGTATCGTCGGACTCCCAGAAACTTCGGTAAAAGAAGCGAGAGACCGCGTACGCAGCGCGATCA
TCAACAGTGAATTTGAATTTCCCGACAAACGTATCACGGTCAATCTTGCCCCTGCCGACTTACCGAAAGAAGGCGGCCGT
TTCGATTTAGCAATTGCAGTTGGGATATTGGCAGCCAGTGGACAAATTCCCTTAGATGCATTGCAGAATTATGAATTTGT
TGCCGAACTCGCCTTATCTGGTGATTTAAGACCAATTATTGGTGAAATCCCATTTACCATAGCCTGCCACGGCCAAAAAC
GAGCAGCCGTCATGACTCACAAGAACGCCAGTATTGCTGCACATATTAATCAAGCAAAAGTTTACGCAGCGACAAACCTG
CGCGCTGTGCAACAACACCTAGCGGGTGAAAAATCTTTACCACCCGCCGAGAAAAGTCAAACAGACGACTCACATTACGA
AAAAATGCTGGATATGACCGACGTTATTGGCCAGACGCACGCTAAAAAAGCACTCGAAATAGCGGCCGCTGGCGGACATC
ACATGCTGATGCTTGGTCCACCCGGCACGGGTAAAACCATGCTAGCGGAACGATTGCCGAGTATTTTGCCAGAAATGAAT
GAACAAGAAGCAATAACCACAGCGGCAATTCATTCAATCAGCGGCAAAAACGCAGCGCTAGAAAACTGGCAAGTACGCCC
GTTTCGTCATCCCCATCATACCTGTTCAGCAGTTGCTTTAGTGGGGGGCTCAAGTAACCCGAAACCGGGTGAAATCTCAT
TGGCCCACAATGGTGTATTATTTTTAGATGAACTTCCCGAGTTTGACCGCAAAGTCATCGATGTACTGCGCGAACCGCTA
GAATCAGGTATGGTAACCATTAGCCGTGCGGCCAGACAGGTAGATTTTCCAGCAAAATTTCAGCTGATAGCGGCACTCAA
CCCATCCCCATGTGGACATTACAATGATGAGCAAATGCGCTCAACGCCAGAACAGATGTTGCGTTATTTAAATAAACTGT
CCGGACCATTTTTAGACCGCATTGATATTCAAATTGAAGTTGCCCGTTTACCCAAAGGCAGTTTGACACAAAAAAATGAC
CGAGGTGAAACCTCCAAGGTCATTCGCCAACGGGTCGTTGAGGCCCGAAATCGACAATTTGCACGACAAGATAAATTAAA
TTGTGATCTATCAAACAAGGAATTAGAAGCGGTAGCGGGAATAGACAAAGCGGATGCAGACTTTTTAGAAACCGCAATCG
AAAAACTCGACCTATCCATTCGTGCTTTTCATCGACTCTTAAAAGTTGCGCGCACAATTGCTGATTTAAATGCACAAGCT
AATGTAGACCGCACACATTTAGCGCAAGCGCTTGGCTACAGAGCCATGGACAGATTATTAAGGAGTTTACATAACATCTG
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comM | Haemophilus influenzae Rd KW20 |
57.171 |
100 |
0.575 |
| comM | Vibrio cholerae strain A1552 |
57.455 |
99.407 |
0.571 |
| comM | Glaesserella parasuis strain SC1401 |
56.805 |
100 |
0.569 |
| comM | Vibrio campbellii strain DS40M4 |
56.436 |
99.802 |
0.563 |
| comM | Legionella pneumophila str. Paris |
53.2 |
98.814 |
0.526 |
| comM | Legionella pneumophila strain ERS1305867 |
53.2 |
98.814 |
0.526 |
| RA0C_RS07335 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
46.047 |
100 |
0.46 |