Detailed information
Bioinformatically predicted
Overview
| Name | comGD | Type | Machinery gene |
| Locus tag | FLP15_RS01230 | Genome accession | NZ_CP041356 |
| Coordinates | 252280..252711 (-) | Length | 143 a.a. |
| NCBI ID | WP_142765691.1 | Uniprot ID | A0A514Z625 |
| Organism | Lactococcus protaetiae strain KACC 19320 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 247280..257711
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FLP15_RS01200 (FLP15_01200) | - | 247746..248476 (-) | 731 | Protein_235 | metal ABC transporter ATP-binding protein | - |
| FLP15_RS01205 (FLP15_01205) | - | 249047..249889 (-) | 843 | WP_142765687.1 | zinc ABC transporter substrate-binding protein | - |
| FLP15_RS01210 (FLP15_01210) | - | 250259..250717 (-) | 459 | WP_142765688.1 | zinc-dependent MarR family transcriptional regulator | - |
| FLP15_RS01215 (FLP15_01215) | comGG | 251284..251580 (-) | 297 | WP_142765689.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| FLP15_RS01220 (FLP15_01220) | comGF | 251609..252001 (-) | 393 | WP_142767397.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FLP15_RS01225 (FLP15_01225) | comGE | 252012..252308 (-) | 297 | WP_142765690.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| FLP15_RS01230 (FLP15_01230) | comGD | 252280..252711 (-) | 432 | WP_142765691.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FLP15_RS01235 (FLP15_01235) | comGC | 252671..252973 (-) | 303 | WP_120772581.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FLP15_RS01240 (FLP15_01240) | comGB | 252977..253999 (-) | 1023 | WP_142767398.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FLP15_RS01245 (FLP15_01245) | comGA | 253905..254888 (-) | 984 | WP_142765692.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FLP15_RS13680 | - | 255681..255905 (-) | 225 | Protein_245 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16559.09 Da Isoelectric Point: 8.4771
>NTDB_id=371480 FLP15_RS01230 WP_142765691.1 252280..252711(-) (comGD) [Lactococcus protaetiae strain KACC 19320]
MRKIREKHVNWQIRAFTLAESLLVLTVISFLTLIFSSVLTKTVHLVRGELFVLQFENLYKNTQEDAALLSTREDFGVSQS
FLTYENHRLKIPDEVRISDFSIQFDEQGENSSLKKIKILLPDEQKTVSYQLEMGSGKFKKTVS
MRKIREKHVNWQIRAFTLAESLLVLTVISFLTLIFSSVLTKTVHLVRGELFVLQFENLYKNTQEDAALLSTREDFGVSQS
FLTYENHRLKIPDEVRISDFSIQFDEQGENSSLKKIKILLPDEQKTVSYQLEMGSGKFKKTVS
Nucleotide
Download Length: 432 bp
>NTDB_id=371480 FLP15_RS01230 WP_142765691.1 252280..252711(-) (comGD) [Lactococcus protaetiae strain KACC 19320]
ATGCGCAAAATAAGGGAGAAACACGTGAATTGGCAGATTAGAGCTTTCACACTAGCGGAGTCCTTACTAGTACTGACTGT
CATAAGTTTTTTAACGCTAATATTTTCGTCAGTACTGACAAAAACGGTGCATTTGGTCAGAGGAGAATTATTTGTCTTAC
AATTTGAAAACTTGTATAAAAACACTCAAGAAGATGCAGCACTACTCTCAACAAGGGAAGATTTCGGGGTGAGTCAATCG
TTTTTAACTTATGAAAATCATAGACTAAAAATACCTGATGAGGTCAGAATTTCTGATTTTTCAATTCAGTTTGATGAGCA
GGGTGAAAATTCAAGCTTGAAAAAAATTAAAATTTTATTACCTGATGAACAAAAAACGGTGAGCTATCAGTTGGAGATGG
GAAGTGGAAAATTTAAAAAAACGGTCAGTTAA
ATGCGCAAAATAAGGGAGAAACACGTGAATTGGCAGATTAGAGCTTTCACACTAGCGGAGTCCTTACTAGTACTGACTGT
CATAAGTTTTTTAACGCTAATATTTTCGTCAGTACTGACAAAAACGGTGCATTTGGTCAGAGGAGAATTATTTGTCTTAC
AATTTGAAAACTTGTATAAAAACACTCAAGAAGATGCAGCACTACTCTCAACAAGGGAAGATTTCGGGGTGAGTCAATCG
TTTTTAACTTATGAAAATCATAGACTAAAAATACCTGATGAGGTCAGAATTTCTGATTTTTCAATTCAGTTTGATGAGCA
GGGTGAAAATTCAAGCTTGAAAAAAATTAAAATTTTATTACCTGATGAACAAAAAACGGTGAGCTATCAGTTGGAGATGG
GAAGTGGAAAATTTAAAAAAACGGTCAGTTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGD | Lactococcus lactis subsp. cremoris KW2 |
58.741 |
100 |
0.587 |
| comYD | Streptococcus mutans UA140 |
40.602 |
93.007 |
0.378 |
| comYD | Streptococcus mutans UA159 |
40.602 |
93.007 |
0.378 |