Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LPA_RS05040 | Genome accession | NC_014125 |
| Coordinates | 1098862..1099461 (+) | Length | 199 a.a. |
| NCBI ID | WP_013101267.1 | Uniprot ID | A0A378K3H7 |
| Organism | Legionella pneumophila 2300/99 Alcoy | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1093862..1104461
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPA_RS05025 (lpa_01397) | - | 1095808..1096815 (-) | 1008 | WP_013101264.1 | hypothetical protein | - |
| LPA_RS05030 (lpa_01398) | pilM | 1097232..1098296 (+) | 1065 | WP_013101265.1 | type IV pilus assembly protein PilM | Machinery gene |
| LPA_RS05035 (lpa_01400) | pilN | 1098300..1098848 (+) | 549 | WP_013101266.1 | PilN domain-containing protein | Machinery gene |
| LPA_RS05040 (lpa_01401) | pilO | 1098862..1099461 (+) | 600 | WP_013101267.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LPA_RS05045 (lpa_01402) | pilP | 1099458..1100042 (+) | 585 | WP_013101268.1 | pilus assembly protein PilP | Machinery gene |
| LPA_RS05050 (lpa_01404) | pilQ | 1100046..1102142 (+) | 2097 | WP_011946023.1 | type IV pilus secretin PilQ | Machinery gene |
| LPA_RS05055 (lpa_01405) | aroK | 1102589..1103116 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| LPA_RS05060 (lpa_01407) | aroB | 1103103..1104212 (+) | 1110 | WP_013101269.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22495.18 Da Isoelectric Point: 5.3369
>NTDB_id=37128 LPA_RS05040 WP_013101267.1 1098862..1099461(+) (pilO) [Legionella pneumophila 2300/99 Alcoy]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKSEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKSEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=37128 LPA_RS05040 WP_013101267.1 1098862..1099461(+) (pilO) [Legionella pneumophila 2300/99 Alcoy]
ATGGACACGGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAATCAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTG
CAGCTAATGAATGAGCGTTTCGGGACCATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCCGGGCTTTTGGAAGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCACGAATTTAGTGTTGAGGGGGTGTCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAATCAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTG
CAGCTAATGAATGAGCGTTTCGGGACCATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCCGGGCTTTTGGAAGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCACGAATTTAGTGTTGAGGGGGTGTCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
98.995 |
100 |
0.99 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |