Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | LPA_RS05035 | Genome accession | NC_014125 |
| Coordinates | 1098300..1098848 (+) | Length | 182 a.a. |
| NCBI ID | WP_013101266.1 | Uniprot ID | A0A378K2G2 |
| Organism | Legionella pneumophila 2300/99 Alcoy | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1093300..1103848
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPA_RS05025 (lpa_01397) | - | 1095808..1096815 (-) | 1008 | WP_013101264.1 | hypothetical protein | - |
| LPA_RS05030 (lpa_01398) | pilM | 1097232..1098296 (+) | 1065 | WP_013101265.1 | type IV pilus assembly protein PilM | Machinery gene |
| LPA_RS05035 (lpa_01400) | pilN | 1098300..1098848 (+) | 549 | WP_013101266.1 | PilN domain-containing protein | Machinery gene |
| LPA_RS05040 (lpa_01401) | pilO | 1098862..1099461 (+) | 600 | WP_013101267.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LPA_RS05045 (lpa_01402) | pilP | 1099458..1100042 (+) | 585 | WP_013101268.1 | pilus assembly protein PilP | Machinery gene |
| LPA_RS05050 (lpa_01404) | pilQ | 1100046..1102142 (+) | 2097 | WP_011946023.1 | type IV pilus secretin PilQ | Machinery gene |
| LPA_RS05055 (lpa_01405) | aroK | 1102589..1103116 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 21336.10 Da Isoelectric Point: 10.1636
>NTDB_id=37127 LPA_RS05035 WP_013101266.1 1098300..1098848(+) (pilN) [Legionella pneumophila 2300/99 Alcoy]
MTEINLLPWREQRREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLINNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDIVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
DVQKKQSPNNEFKLSFVLKPKY
MTEINLLPWREQRREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLINNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDIVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
DVQKKQSPNNEFKLSFVLKPKY
Nucleotide
Download Length: 549 bp
>NTDB_id=37127 LPA_RS05035 WP_013101266.1 1098300..1098848(+) (pilN) [Legionella pneumophila 2300/99 Alcoy]
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAGACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGGATTATCATTGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTCTCTCATTTAATAAATAATCAAATGAACCGAA
ACCAGATTTTACAAAAAGAAATTACTGCTTTAGATGAGCAGATCAAGGAGATTAAGGCACTAAAACAAATCAGGGAAGGT
TTGATTTCGAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGGACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGCGTTTACATAACCAAGATGCAAAGAGAACACGATATAGTAACACTCTGGGGGTATTCTGAGTCGA
ATACAAGTATTTCTATTTTAATGAGAAATATAGAGGCTAATGTCTGGATACAGAATCCTGTCCTAACTGAAATTAAAAAA
GATGTTCAAAAAAAACAGTCTCCAAATAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAGACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGGATTATCATTGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTCTCTCATTTAATAAATAATCAAATGAACCGAA
ACCAGATTTTACAAAAAGAAATTACTGCTTTAGATGAGCAGATCAAGGAGATTAAGGCACTAAAACAAATCAGGGAAGGT
TTGATTTCGAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGGACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGCGTTTACATAACCAAGATGCAAAGAGAACACGATATAGTAACACTCTGGGGGTATTCTGAGTCGA
ATACAAGTATTTCTATTTTAATGAGAAATATAGAGGCTAATGTCTGGATACAGAATCCTGTCCTAACTGAAATTAAAAAA
GATGTTCAAAAAAAACAGTCTCCAAATAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
96.703 |
100 |
0.967 |