Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | FLK62_RS00375 | Genome accession | NZ_CP041334 |
| Coordinates | 82106..83233 (-) | Length | 375 a.a. |
| NCBI ID | WP_176443346.1 | Uniprot ID | A0A859ID46 |
| Organism | Glaesserella parasuis strain HPS412 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 77106..88233
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FLK62_RS00355 (FLK62_00360) | - | 78535..79335 (-) | 801 | WP_015939835.1 | ChaN family lipoprotein | - |
| FLK62_RS00360 (FLK62_00365) | - | 79443..80231 (-) | 789 | WP_176443343.1 | heme ABC transporter ATP-binding protein | - |
| FLK62_RS00365 (FLK62_00370) | - | 80231..81217 (-) | 987 | WP_176443344.1 | iron ABC transporter permease | - |
| FLK62_RS00370 (FLK62_00375) | - | 81217..82053 (-) | 837 | WP_176443345.1 | ABC transporter substrate-binding protein | - |
| FLK62_RS00375 (FLK62_00380) | dprA | 82106..83233 (-) | 1128 | WP_176443346.1 | DNA-processing protein DprA | Machinery gene |
| FLK62_RS00380 (FLK62_00385) | def | 83568..84080 (+) | 513 | WP_005712670.1 | peptide deformylase | - |
| FLK62_RS00385 (FLK62_00390) | rfaD | 84092..85018 (+) | 927 | WP_021110191.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| FLK62_RS00390 | - | 85110..85253 (+) | 144 | WP_010787341.1 | hypothetical protein | - |
| FLK62_RS00395 (FLK62_00395) | - | 85234..85518 (+) | 285 | WP_016528596.1 | hypothetical protein | - |
| FLK62_RS00400 | - | 85666..85806 (+) | 141 | WP_157686074.1 | hypothetical protein | - |
| FLK62_RS00410 (FLK62_00405) | selA | 86341..87726 (+) | 1386 | WP_176443347.1 | L-seryl-tRNA(Sec) selenium transferase | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 41675.79 Da Isoelectric Point: 5.8060
>NTDB_id=371263 FLK62_RS00375 WP_176443346.1 82106..83233(-) (dprA) [Glaesserella parasuis strain HPS412]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQVLQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAAN
ENGITIAVLGSGLDQVYPARHKKLAEQIVETSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSAPKLAKKLPEL
TACQQQLFEQISLEPISVDDLAKATDMAVETALIELLNLELLGVVKQVSGGYVIT
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQVLQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAAN
ENGITIAVLGSGLDQVYPARHKKLAEQIVETSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSAPKLAKKLPEL
TACQQQLFEQISLEPISVDDLAKATDMAVETALIELLNLELLGVVKQVSGGYVIT
Nucleotide
Download Length: 1128 bp
>NTDB_id=371263 FLK62_RS00375 WP_176443346.1 82106..83233(-) (dprA) [Glaesserella parasuis strain HPS412]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATACGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATTGATCAGGTGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACTTTATTT
GACGAAGATTATCCTTTTTTACTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGGGGGAATGTTGAAAGTTT
ATCGTTACCACAGATAGCTATCGTCGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGCCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCATAAAAAACTTGCTGAACA
AATCGTTGAAACAAGCGGTGCGTTAGTATCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTCCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTAGGAACATTGGTTATTGAAGCAACAGTGAATAGTGGCTCGCTCATTACTGCCCGT
TATGCGTTAGAGCAAGGGCGAGAAGTCTTTGCATTGCCGAACGCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAATCAGTGCATA
TTCAACCAAGCCTGTTTGATACGAAACCTAAACAAGCGGTGAAATCTGCCCCAAAATTGGCAAAAAAACTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCGTTGATGATCTTGCCAAAGCAACAGATAT
GGCGGTAGAAACCGCATTGATTGAGCTGCTGAATTTGGAGTTGTTGGGCGTAGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATACGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATTGATCAGGTGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACTTTATTT
GACGAAGATTATCCTTTTTTACTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGGGGGAATGTTGAAAGTTT
ATCGTTACCACAGATAGCTATCGTCGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGCCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCATAAAAAACTTGCTGAACA
AATCGTTGAAACAAGCGGTGCGTTAGTATCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTCCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTAGGAACATTGGTTATTGAAGCAACAGTGAATAGTGGCTCGCTCATTACTGCCCGT
TATGCGTTAGAGCAAGGGCGAGAAGTCTTTGCATTGCCGAACGCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAATCAGTGCATA
TTCAACCAAGCCTGTTTGATACGAAACCTAAACAAGCGGTGAAATCTGCCCCAAAATTGGCAAAAAAACTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCGTTGATGATCTTGCCAAAGCAACAGATAT
GGCGGTAGAAACCGCATTGATTGAGCTGCTGAATTTGGAGTTGTTGGGCGTAGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
97.6 |
100 |
0.976 |
| dprA | Vibrio campbellii strain DS40M4 |
47.453 |
99.467 |
0.472 |
| dprA | Haemophilus influenzae Rd KW20 |
52.522 |
89.867 |
0.472 |
| dprA | Vibrio cholerae strain A1552 |
43.883 |
100 |
0.44 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.36 |
100 |
0.387 |
| dprA | Neisseria gonorrhoeae MS11 |
43.492 |
84 |
0.365 |
| dprA | Neisseria gonorrhoeae strain FA1090 |
43.175 |
84 |
0.363 |