Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   FHI56_RS01900 Genome accession   NZ_CP040804
Coordinates   167725..168960 (-) Length   411 a.a.
NCBI ID   WP_013991347.1    Uniprot ID   A0AB37CMH1
Organism   Streptococcus salivarius strain LAB813     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 162725..173960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHI56_RS01880 (FHI56_01880) - 163755..163946 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  FHI56_RS01885 (FHI56_01885) dnaN 163998..165134 (-) 1137 WP_013989872.1 DNA polymerase III subunit beta -
  FHI56_RS01890 (FHI56_01890) dnaA 165289..166653 (-) 1365 WP_013989871.1 chromosomal replication initiator protein DnaA -
  FHI56_RS01895 (FHI56_01895) spo0J 166892..167659 (-) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  FHI56_RS01900 (FHI56_01900) htrA 167725..168960 (-) 1236 WP_013991347.1 S1C family serine protease Regulator
  FHI56_RS01905 (FHI56_01905) rlmH 169166..169645 (+) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FHI56_RS01910 (FHI56_01910) - 169661..170344 (+) 684 WP_013991345.1 YoaK family protein -
  FHI56_RS01930 (FHI56_01930) - 170899..173493 (-) 2595 WP_049528176.1 YfhO family protein -

Sequence

Protein


Download         Length: 411 a.a.        Molecular weight: 42915.09 Da        Isoelectric Point: 4.6266

>NTDB_id=367325 FHI56_RS01900 WP_013991347.1 167725..168960(-) (htrA) [Streptococcus salivarius strain LAB813]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNSTDTGVKTAKTVYNNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSSQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDDVKAGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=367325 FHI56_RS01900 WP_013991347.1 167725..168960(-) (htrA) [Streptococcus salivarius strain LAB813]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTGCTCGGTGGTTTGCTAGGTGC
CTTTATCCTACTAACAGCAGCAGGGGTATCTTTTACCAATTCAACAGATACAGGTGTTAAAACAGCTAAGACCGTATACA
ATAATACAACAGATACAACTAAAGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTACCAAGAAGGGTCA
TCTTCAGATTCTCTAAATGAACTTTATGGCCGTATCTTTGGTGGAGATGATAGTTCTGACTCTAGCCAAGACAAATCAAA
AGATTCTGATGGGTTACAAGTCGCTGGTGAAGGTTCCGGTGTTATCTACAAAAAGGATGGTAAAGAGGCTTATATCGTAA
CCAACAACCACGTTGTCGATGGCGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTCGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATTAAAACCGTAGCGGAATTTGCAGACTC
AAACTCTCTCACAGTCGGTGAGAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAGG
GAATCGTTTCTAGCCTTAGCCGTACCGTAACTATGCAAAACGACAATGGTGAAACTGTTTCAACAAATGCTATCCAAACA
GATGCTGCCATTAACCCTGGTAACTCAGGTGGTGCCTTAGTCAATATCGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCAGCAGTCGCTGGTAGCGCCGTTGAAGGTATGGGATTTGCCATTCCATCAAACGATGTTGTCGAAA
TCATCAATCAATTGGAAAAAGACGGTAAAGTTACACGACCAGCCCTAGGAATCTCAATGGCCGATCTTAACAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGATGTGAAAGCTGGAGTTGTAGTCGGCAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATCACTGAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAACCTTTACAGCCATAGTATCGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTGTCTGACTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-406)

Trypsin-like peptidase domain (Trypsin_2)

(118-263)

PDZ domain (PDZ_2)

(307-402)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.787

98.054

0.606
  htrA Streptococcus gordonii str. Challis substr. CH1

57.389

98.783

0.567
  htrA Streptococcus pneumoniae Rx1

54.279

99.513

0.54
  htrA Streptococcus pneumoniae R6

54.279

99.513

0.54
  htrA Streptococcus pneumoniae TIGR4

54.279

99.513

0.54
  htrA Streptococcus pneumoniae D39

54.279

99.513

0.54
  htrA Streptococcus mitis NCTC 12261

54.279

99.513

0.54

Multiple sequence alignment