Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FHI56_RS01895 Genome accession   NZ_CP040804
Coordinates   166892..167659 (-) Length   255 a.a.
NCBI ID   WP_013991348.1    Uniprot ID   A0AB33ZDS6
Organism   Streptococcus salivarius strain LAB813     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 161892..172659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHI56_RS01875 (FHI56_01875) ychF 162430..163545 (-) 1116 WP_002883967.1 redox-regulated ATPase YchF -
  FHI56_RS01880 (FHI56_01880) - 163755..163946 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  FHI56_RS01885 (FHI56_01885) dnaN 163998..165134 (-) 1137 WP_013989872.1 DNA polymerase III subunit beta -
  FHI56_RS01890 (FHI56_01890) dnaA 165289..166653 (-) 1365 WP_013989871.1 chromosomal replication initiator protein DnaA -
  FHI56_RS01895 (FHI56_01895) spo0J 166892..167659 (-) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  FHI56_RS01900 (FHI56_01900) htrA 167725..168960 (-) 1236 WP_013991347.1 S1C family serine protease Regulator
  FHI56_RS01905 (FHI56_01905) rlmH 169166..169645 (+) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FHI56_RS01910 (FHI56_01910) - 169661..170344 (+) 684 WP_013991345.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29363.86 Da        Isoelectric Point: 9.5843

>NTDB_id=367324 FHI56_RS01895 WP_013991348.1 166892..167659(-) (spo0J) [Streptococcus salivarius strain LAB813]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=367324 FHI56_RS01895 WP_013991348.1 166892..167659(-) (spo0J) [Streptococcus salivarius strain LAB813]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCCT
ATATCAGTAACGCTCTTAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAACTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
TGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576

Multiple sequence alignment