Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   SMUNN2025_RS08605 Genome accession   NC_013928
Coordinates   1780438..1782720 (-) Length   760 a.a.
NCBI ID   WP_002277918.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 1775438..1787720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS08590 (SmuNN2025_1677) ulaG 1775805..1776896 (-) 1092 WP_002263526.1 L-ascorbate 6-phosphate lactonase -
  SMUNN2025_RS08595 (SmuNN2025_1678) - 1777476..1779140 (-) 1665 WP_012997940.1 BglG family transcription antiterminator -
  SMUNN2025_RS08600 (SmuNN2025_1679) comB/nlmE 1779513..1780424 (-) 912 WP_002269618.1 HlyD family efflux transporter periplasmic adaptor subunit Regulator
  SMUNN2025_RS08605 (SmuNN2025_1680) comA/nlmT 1780438..1782720 (-) 2283 WP_002277918.1 peptide cleavage/export ABC transporter Regulator
  SMUNN2025_RS08610 (SmuNN2025_1682) - 1783375..1783779 (-) 405 WP_002269821.1 hypothetical protein -
  SMUNN2025_RS08615 (SmuNN2025_1683) - 1783798..1784016 (-) 219 WP_002278140.1 Blp family class II bacteriocin -
  SMUNN2025_RS10495 - 1784296..1784487 (-) 192 WP_162465514.1 hypothetical protein -
  SMUNN2025_RS08620 (SmuNN2025_1685) - 1785095..1785373 (-) 279 WP_002278151.1 hypothetical protein -
  SMUNN2025_RS08625 (SmuNN2025_1686) - 1785611..1785820 (-) 210 WP_002273561.1 hypothetical protein -
  SMUNN2025_RS10195 (SmuNN2025_1687) - 1786303..1786464 (-) 162 WP_162137516.1 hypothetical protein -
  SMUNN2025_RS10565 - 1786505..1786681 (-) 177 WP_079993450.1 hypothetical protein -
  SMUNN2025_RS08630 (SmuNN2025_1688) - 1786678..1786953 (-) 276 WP_002278146.1 hypothetical protein -

Sequence


Protein


Download         Length: 760 a.a.        Molecular weight: 85094.76 Da        Isoelectric Point: 8.9095

>NTDB_id=36613 SMUNN2025_RS08605 WP_002277918.1 1780438..1782720(-) (comA/nlmT) [Streptococcus mutans NN2025]
MKQVIYVVLIVIAVNILLEVIKRVTKRGGTVSSSNPLPDGQSKLFWRRHYKLVPQIDTRDCGPAVLASVAKHYGSNYSIA
YLRELSKTNKQGTTALGIVEAAKKLGFETRSIKADMTLFDYNDLTYPFIVHVIKGKRLQHYYVVYGSQNNQLIIGDPDPS
VKVTRMSKERFQSEWTGLAIFLAPQPNYKPHKGEKNGLSNFFPLIFKQKALMTYIIIASLIVTLIDIVGSYYLQGILDEY
IPDQLISTLGMITIGLIITYIIQQVMAFAKEYLLAVLSLRLVIDVILSYIKHIFTLPISFFATRRTGEITSRFTDANQII
DAVASTIFSIFLDMTMVILVGGVLLAQNNNLFFLTLLSIPIYAIIIFAFLKPFEKMNHEVMESNAVVSSSIIEDINGMET
IKSLTSESARYQNIDSEFVDYLEKNFKLHKYSAIQTALKSGAKLILNVVILWYGSRLVMDNKISVGQLITFNALLSYFSN
PIENIINLQSKLQSARVANTRLNEVYLVESEFEKDGDLSENSFLDGDISFENLSYKYGFGRDTLSDINLSIKKGSKVSLV
GASGSGKTTLTKLIVNFYEPNKGIVRINGNDLKVIDKTALRRHISYLPQQAYVFSGSIMDNLVLGAKEGTSQEDIIRACE
IAEIRSDIEQMPQGYQTELSDGAGISGGQKQRIALARALLTQAPVLILDEATSSLDILTEKKIISNLLQMTEKTIIFVAH
RLSISQRTDEVIVMDQGKIVEQGTHKELLAKQGFYYNLFN

Nucleotide


Download         Length: 2283 bp        

>NTDB_id=36613 SMUNN2025_RS08605 WP_002277918.1 1780438..1782720(-) (comA/nlmT) [Streptococcus mutans NN2025]
ATGAAACAAGTTATTTATGTTGTTTTAATCGTCATAGCCGTTAACATTCTCTTAGAGGTTATCAAAAGAGTAACAAAAAG
GGGAGGGACAGTTTCGTCATCTAATCCTTTACCAGATGGGCAGTCTAAGTTGTTTTGGCGCAGACATTATAAGCTAGTAC
CTCAGATTGATACCAGAGACTGTGGGCCGGCAGTGCTGGCATCTGTTGCAAAGCATTACGGATCTAACTACTCTATCGCT
TATCTGCGGGAACTCTCAAAGACTAACAAGCAGGGAACAACAGCTCTTGGCATTGTTGAAGCTGCTAAAAAGTTAGGCTT
TGAAACACGCTCTATCAAGGCGGATATGACGCTTTTTGATTATAATGATTTGACCTATCCTTTTATCGTCCATGTGATTA
AAGGAAAACGTCTGCAGCATTATTATGTCGTCTATGGCAGCCAGAATAATCAGCTGATTATTGGAGATCCTGATCCTTCA
GTTAAGGTGACTAGGATGAGTAAGGAACGCTTTCAATCAGAGTGGACAGGCCTTGCAATTTTCCTAGCTCCTCAGCCTAA
CTATAAGCCTCATAAAGGTGAAAAAAATGGTTTGTCTAATTTCTTCCCGTTGATCTTTAAGCAGAAAGCTTTGATGACTT
ATATTATCATAGCTAGCTTGATTGTGACGCTCATTGATATTGTCGGATCATACTATCTCCAAGGAATATTGGACGAGTAC
ATTCCTGATCAGCTGATTTCAACTTTAGGAATGATTACGATTGGTCTGATAATAACCTATATTATCCAGCAGGTCATGGC
TTTTGCAAAAGAATACCTCTTGGCCGTACTCAGTTTGCGTTTAGTCATTGATGTTATCCTGTCTTATATCAAACATATTT
TTACGCTTCCTATATCTTTCTTTGCGACAAGGCGAACAGGAGAAATCACGTCTCGTTTTACAGATGCCAATCAGATTATT
GATGCTGTAGCGTCAACCATCTTTTCAATCTTTTTAGATATGACTATGGTAATTTTGGTTGGCGGGGTTTTGTTGGCGCA
AAACAATAACCTTTTCTTTCTAACCTTGCTCTCCATTCCGATTTATGCCATCATTATTTTTGCTTTCTTGAAACCCTTTG
AGAAAATGAATCACGAAGTGATGGAAAGCAATGCTGTGGTAAGTTCTTCTATCATTGAAGATATCAATGGGATGGAAACC
ATTAAATCACTCACAAGTGAGTCCGCTCGTTATCAAAACATTGATAGTGAATTTGTTGATTATTTGGAGAAAAACTTTAA
GCTACACAAGTATAGTGCCATTCAAACCGCATTAAAAAGCGGTGCTAAGCTTATCCTCAATGTTGTCATTCTCTGGTATG
GCTCTCGTCTAGTTATGGATAATAAAATCTCAGTTGGTCAGCTTATCACCTTTAATGCTTTGCTGTCTTATTTCTCAAAT
CCAATTGAAAATATTATCAATCTGCAATCCAAACTGCAGTCAGCTCGCGTTGCCAATACACGTCTTAATGAGGTCTATCT
TGTCGAATCTGAATTTGAAAAAGACGGCGATTTATCAGAAAATAGCTTTTTAGATGGTGATATTTCGTTTGAAAATCTTT
CTTATAAATATGGATTTGGGCGAGATACCTTATCAGATATTAATTTATCAATCAAAAAAGGCTCCAAGGTCAGTCTAGTT
GGAGCCAGTGGTTCTGGTAAGACAACTTTGACTAAACTGATTGTCAATTTCTACGAGCCTAACAAGGGGATTGTTCGAAT
CAATGGCAATGATTTAAAAGTTATTGATAAGACAGCTTTGCGGCGGCATATTAGCTATTTGCCGCAACAGGCCTATGTTT
TTAGTGGCTCTATTATGGATAATCTCGTTTTAGGAGCTAAAGAAGGAACGAGTCAGGAAGACATTATTCGTGCTTGTGAA
ATTGCTGAAATCCGCTCGGACATTGAACAAATGCCTCAGGGCTATCAGACAGAGTTATCAGATGGTGCCGGTATTTCTGG
CGGTCAAAAACAGCGGATTGCTTTAGCTAGGGCCTTATTAACGCAGGCACCGGTTTTGATTCTGGATGAAGCCACCAGCA
GTCTTGATATTTTGACAGAAAAGAAAATTATCAGCAATCTCTTACAGATGACGGAGAAAACAATAATTTTTGTTGCCCAC
CGCTTAAGCATTTCACAGCGTACTGACGAAGTCATTGTTATGGATCAGGGAAAAATTGTTGAACAAGGCACTCATAAGGA
ACTTTTAGCTAAGCAAGGTTTCTATTATAACCTGTTTAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

99.605

100

0.996

  comA Streptococcus mitis NCTC 12261

65.132

94.342

0.614

  comA Streptococcus pneumoniae Rx1

64.575

94.342

0.609

  comA Streptococcus pneumoniae D39

64.575

94.342

0.609

  comA Streptococcus pneumoniae R6

64.575

94.342

0.609

  comA Streptococcus mitis SK321

64.435

94.342

0.608

  comA Streptococcus pneumoniae TIGR4

64.296

94.342

0.607

  comA Streptococcus gordonii str. Challis substr. CH1

64.156

94.342

0.605


Multiple sequence alignment