Detailed information    

insolico Bioinformatically predicted

Overview

Name   comYG   Type   Machinery gene
Locus tag   SMUNN2025_RS00990 Genome accession   NC_013928
Coordinates   206999..207388 (+) Length   129 a.a.
NCBI ID   WP_002278009.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 201999..212388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS00955 (SmuNN2025_0170) - 203207..203590 (+) 384 WP_002263434.1 DUF1033 family protein -
  SMUNN2025_RS00960 (SmuNN2025_0171) comYA 203722..204663 (+) 942 WP_002263435.1 competence type IV pilus ATPase ComGA Machinery gene
  SMUNN2025_RS00965 (SmuNN2025_0172) comYB 204599..205630 (+) 1032 WP_255262945.1 competence type IV pilus assembly protein ComGB Machinery gene
  SMUNN2025_RS00970 (SmuNN2025_0173) comYC 205630..205944 (+) 315 WP_002263437.1 competence type IV pilus major pilin ComGC Machinery gene
  SMUNN2025_RS00975 (SmuNN2025_0174) comYD 205931..206335 (+) 405 WP_002273742.1 competence type IV pilus minor pilin ComGD Machinery gene
  SMUNN2025_RS00980 (SmuNN2025_0175) comYE 206307..206600 (+) 294 WP_002263439.1 competence type IV pilus minor pilin ComGE Machinery gene
  SMUNN2025_RS00985 (SmuNN2025_0176) comYF 206587..207021 (+) 435 WP_002264245.1 competence type IV pilus minor pilin ComGF Machinery gene
  SMUNN2025_RS00990 (SmuNN2025_0177) comYG 206999..207388 (+) 390 WP_002278009.1 competence type IV pilus minor pilin ComGG Machinery gene
  SMUNN2025_RS00995 (SmuNN2025_0178) comYH 207443..208396 (+) 954 WP_002278010.1 class I SAM-dependent methyltransferase Machinery gene
  SMUNN2025_RS01000 (SmuNN2025_0179) - 208455..209654 (+) 1200 WP_002265895.1 acetate kinase -
  SMUNN2025_RS01005 (SmuNN2025_0180) - 210215..210460 (+) 246 WP_002278011.1 helix-turn-helix transcriptional regulator -
  SMUNN2025_RS01010 (SmuNN2025_0181) - 210429..210869 (+) 441 WP_002263445.1 hypothetical protein -
  SMUNN2025_RS01015 (SmuNN2025_0182) - 210922..211584 (+) 663 WP_002263446.1 type II CAAX endopeptidase family protein -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14988.29 Da        Isoelectric Point: 10.2940

>NTDB_id=36564 SMUNN2025_RS00990 WP_002278009.1 206999..207388(+) (comYG) [Streptococcus mutans NN2025]
MLFMKKIKAGVLLYALFMSAIFSFFLQFYLNRVVATERQNQAQLSASKAYLIADLTQDLAKDNFGQLTFNHGRSSYHKQE
GELLIKVHLTDGQSYQYRFNCVTENKEKGKFSVANKTFTKSIEKRHFQK

Nucleotide


Download         Length: 390 bp        

>NTDB_id=36564 SMUNN2025_RS00990 WP_002278009.1 206999..207388(+) (comYG) [Streptococcus mutans NN2025]
ATGCTTTTCATGAAAAAAATTAAAGCAGGCGTACTTCTATATGCTCTGTTTATGTCAGCAATCTTTAGTTTTTTCTTACA
ATTTTATCTTAATCGTGTTGTAGCAACAGAGAGACAAAATCAGGCACAATTATCGGCCAGTAAAGCTTATCTTATAGCAG
ATCTAACTCAAGATTTGGCTAAAGACAACTTTGGGCAGTTGACTTTTAATCACGGAAGGTCTAGTTATCATAAACAGGAG
GGGGAACTTCTGATAAAAGTCCATTTGACAGATGGTCAGTCCTACCAATATCGTTTTAACTGTGTAACAGAAAATAAGGA
AAAAGGAAAATTTAGTGTGGCTAATAAAACTTTTACTAAATCTATAGAAAAACGTCATTTTCAAAAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comYG Streptococcus mutans UA140

99.225

100

0.992
  comYG Streptococcus mutans UA159

99.225

100

0.992

Multiple sequence alignment