Detailed information NTG0364839

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BPGQ101_RS17290
• Genome accession: NZ_CP040514
• Coordinates: 3306510..3307196 (-)
• Length: 228 a.a.
• NCBI ID: WP_208755857.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain GQYP101
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3301510..3312196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPGQ101_RS17255 (BPGQ101_17255)	fliW	3301646..3302080 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
BPGQ101_RS17260 (BPGQ101_17260)	-	3302109..3302687 (-)	579	WP_138279061.1	DUF6470 family protein	-
BPGQ101_RS17265 (BPGQ101_17265)	flgL	3302734..3303645 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
BPGQ101_RS17270 (BPGQ101_17270)	flgK	3303654..3305174 (-)	1521	WP_024719239.1	flagellar hook-associated protein FlgK	-
BPGQ101_RS17275 (BPGQ101_17275)	-	3305190..3305672 (-)	483	WP_007499977.1	flagellar protein FlgN	-
BPGQ101_RS17280 (BPGQ101_17280)	flgM	3305691..3305954 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
BPGQ101_RS17285 (BPGQ101_17285)	-	3306034..3306453 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
BPGQ101_RS17290 (BPGQ101_17290)	comFC	3306510..3307196 (-)	687	WP_208755857.1	ComF family protein	Machinery gene
BPGQ101_RS17295 (BPGQ101_17295)	-	3307193..3307486 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
BPGQ101_RS17300 (BPGQ101_17300)	comFA	3307551..3308930 (-)	1380	WP_138279275.1	DEAD/DEAH box helicase	Machinery gene
BPGQ101_RS17305 (BPGQ101_17305)	-	3309049..3309891 (-)	843	WP_024719242.1	DegV family protein	-
BPGQ101_RS17310 (BPGQ101_17310)	degU	3310103..3310792 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BPGQ101_RS17315 (BPGQ101_17315)	degS	3310857..3312032 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26102.63 Da
• Isoelectric Point: 10.1478

>NTDB_id=364839 BPGQ101_RS17290 WP_208755857.1 3306510..3307196(-) (comFC) [Bacillus altitudinis strain GQYP101]
MICPICESHFVAAFTWKSFLLINEDLLCVACKNHLMKIQGPTCPKCGRTQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=364839 BPGQ101_RS17290 WP_208755857.1 3306510..3307196(-) (comFC) [Bacillus altitudinis strain GQYP101]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTTGCTGCTTTTACATGGAAATCATTCCTACTAATAAATGAAGATCTTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAACGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCTAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373