Detailed information NTG0036322

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: SMI_RS06195
• Genome accession: NC_013853
• Coordinates: 1219327..1220175 (-)
• Length: 282 a.a.
• NCBI ID: WP_000705314.1
• Uniprot ID: -
• Organism: Streptococcus mitis B6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1214327..1225175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMI_RS06175 (smi_1219)	-	1215080..1215736 (-)	657	WP_000461591.1	MmcQ/YjbR family DNA-binding protein	-
SMI_RS06180 (smi_1220)	-	1215780..1216412 (-)	633	WP_000638764.1	copper homeostasis protein CutC	-
SMI_RS06185 (smi_1221)	-	1216506..1216865 (-)	360	WP_001237212.1	YbaN family protein	-
SMI_RS06190 (smi_1222)	topA	1217122..1219209 (-)	2088	WP_000179617.1	type I DNA topoisomerase	-
SMI_RS06195 (smi_1223)	dprA/cilB/dalA	1219327..1220175 (-)	849	WP_000705314.1	DNA-processing protein DprA	Machinery gene
SMI_RS06200 (smi_1224)	-	1220268..1220957 (-)	690	WP_000643965.1	sugar phosphate nucleotidyltransferase	-
SMI_RS06205 (smi_1225)	-	1220969..1221847 (-)	879	WP_000791851.1	DMT family transporter	-
SMI_RS06210 (smi_1226)	-	1221837..1222706 (-)	870	WP_000411197.1	phosphotransferase	-
SMI_RS06215 (smi_1227)	-	1222723..1223745 (-)	1023	WP_000609910.1	ribitol-5-phosphate dehydrogenase	-
SMI_RS06220 (smi_1228)	-	1223750..1224457 (-)	708	WP_000638485.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31132.82 Da
• Isoelectric Point: 5.2151

>NTDB_id=36322 SMI_RS06195 WP_000705314.1 1219327..1220175(-) (dprA/cilB/dalA) [Streptococcus mitis B6]
MKITNYEIYKLKKSGLTNQQILKVLEYGENVDQELLLGDIAEISGCRNPAVFMERYFQIDDAHLEKEFQKFPSFSILDDC
YPWDLSEIYDAPVLLFYKGNLDLLKFPKVAVVGSRACSKQGAKSVEKVIQGLENELVIVSGLAKGIDTAAHMAALQNGGK
TIAVIGTGLDVFYPKANKRLQDYIGNDHLILSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAMEE
GRDVFAIPGSILDGLSDGCHHLIQEGAKLVTSGQDVLAEFEF

Nucleotide

• Length: 849 bp

>NTDB_id=36322 SMI_RS06195 WP_000705314.1 1219327..1220175(-) (dprA/cilB/dalA) [Streptococcus mitis B6]
ATGAAAATCACAAACTATGAAATCTATAAGTTAAAAAAGTCAGGTTTGACCAACCAACAGATTTTGAAAGTCCTAGAATA
TGGTGAAAATGTTGATCAGGAACTTTTATTGGGTGATATTGCAGAAATATCAGGTTGCCGAAATCCAGCTGTTTTTATGG
AACGTTATTTTCAGATAGACGATGCGCATTTGGAGAAGGAGTTTCAAAAATTTCCATCTTTCTCTATTTTAGACGACTGT
TATCCTTGGGATTTGAGTGAAATATATGATGCACCTGTGCTTTTATTTTACAAGGGAAATCTGGACCTCTTGAAATTTCC
TAAGGTAGCGGTCGTGGGCAGTCGTGCTTGTAGCAAACAGGGAGCTAAGTCAGTTGAAAAAGTCATTCAGGGCTTGGAAA
ATGAACTAGTTATCGTCAGTGGCTTAGCCAAGGGCATTGACACAGCAGCTCATATGGCAGCTCTGCAGAATGGTGGAAAA
ACCATTGCAGTGATTGGAACAGGACTGGATGTGTTTTATCCTAAAGCCAATAAACGCTTGCAAGACTACATCGGCAATGA
CCATCTGATTCTTAGTGAATATGGACCTGGTGAACAACCTCTAAAATTTCATTTTCCTGCCCGTAATCGCATCATTGCTG
GACTTTGTCGTGGTGTGATTGTAGCAGAGGCTAAGATGCGTTCAGGTAGTCTCATTACCTGTGAGAGGGCAATGGAAGAA
GGACGCGATGTTTTTGCTATACCTGGTAGCATTTTAGATGGACTATCTGATGGATGTCATCATTTGATTCAAGAAGGAGC
AAAATTGGTCACCAGTGGGCAAGATGTTCTTGCGGAATTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	98.936	100	0.989
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	98.936	100	0.989
dprA/cilB/dalA	Streptococcus pneumoniae D39	98.936	100	0.989
dprA/cilB/dalA	Streptococcus pneumoniae R6	98.936	100	0.989
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	98.936	100	0.989
dprA/cilB/dalA	Streptococcus mitis SK321	97.518	100	0.975
dprA	Streptococcus mutans UA159	63.214	99.291	0.628
dprA	Lactococcus lactis subsp. cremoris KW2	55.357	99.291	0.55
dprA	Haemophilus influenzae Rd KW20	38.202	94.681	0.362