Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   FD735_RS01370 Genome accession   NZ_CP040231
Coordinates   238283..239779 (+) Length   498 a.a.
NCBI ID   WP_000759891.1    Uniprot ID   I0Q2A0
Organism   Streptococcus sp. 1643     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 233283..244779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS01350 (FD735_01350) endA 233438..234262 (+) 825 WP_049505185.1 DNA/RNA non-specific endonuclease Machinery gene
  FD735_RS01355 (FD735_01355) - 234403..235734 (+) 1332 WP_071851874.1 hemolysin family protein -
  FD735_RS01365 (FD735_01365) amiA 236237..238216 (+) 1980 WP_049505183.1 peptide ABC transporter substrate-binding protein Regulator
  FD735_RS01370 (FD735_01370) amiC 238283..239779 (+) 1497 WP_000759891.1 ABC transporter permease Regulator
  FD735_RS01375 (FD735_01375) amiD 239779..240705 (+) 927 WP_000103692.1 oligopeptide ABC transporter permease OppC Regulator
  FD735_RS01380 (FD735_01380) amiE 240714..241781 (+) 1068 WP_139658306.1 ABC transporter ATP-binding protein Regulator
  FD735_RS01385 (FD735_01385) amiF 241792..242721 (+) 930 WP_001291311.1 ATP-binding cassette domain-containing protein Regulator
  FD735_RS01390 (FD735_01390) - 242810..244249 (-) 1440 WP_139658307.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55727.14 Da        Isoelectric Point: 9.2425

>NTDB_id=362626 FD735_RS01370 WP_000759891.1 238283..239779(+) (amiC) [Streptococcus sp. 1643]
MKKYIFMRVLRSLLSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTPDKRDNYENTVYERMGYIEYYDTKELQERAS
TMDSSVTVDANDTNKAIYEKYINQLGNGWTLGVFSESGQFYATREIPIFERVFKFYANLIDIDHPNKIQDPENPNLQRYL
RFENDPAIGWSLVGSGTKHKYLLYFNNQFPFVHQNFVNINLGDSYPTYANTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
DIYSRTYKSPSQADAREVANYGKDDPYTATESNYQYPSMIASSAVAGLIGLIISYAIAIPLGSAMARHKNTWIDSFSTGA
LTFLLALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPSTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLFVGD
IWMTMLDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=362626 FD735_RS01370 WP_000759891.1 238283..239779(+) (amiC) [Streptococcus sp. 1643]
ATGAAGAAATATATTTTTATGCGTGTATTGCGTTCATTGTTGTCTATTTTCTTGGTGACAACCTTGACCTACACAATAAT
TTATACGATGGTTCCTCGAAAATTGATTTTCAAGCAGGATACCAACTATAACAAGATTGCAACGACGCCGGACAAGCGGG
ATAATTATGAAAATACCGTTTATGAACGGATGGGCTATATCGAGTACTACGATACCAAAGAGTTGCAAGAAAGAGCGAGC
ACAATGGACTCATCCGTAACAGTGGATGCCAATGATACTAATAAGGCAATCTACGAAAAATACATCAACCAACTAGGAAA
TGGTTGGACACTTGGTGTGTTCTCAGAAAGTGGTCAATTCTATGCTACGCGTGAAATTCCGATTTTTGAACGTGTTTTCA
AATTCTATGCGAACTTGATTGATATTGATCATCCAAATAAGATTCAAGACCCTGAAAATCCAAACTTGCAACGTTATCTT
CGTTTTGAAAATGACCCTGCTATCGGTTGGTCATTGGTTGGTTCAGGTACAAAACATAAATACCTTTTGTATTTCAACAA
TCAATTCCCATTTGTACACCAAAACTTTGTGAACATTAACTTGGGAGATTCTTACCCAACTTATGCAAACACACCAGTGC
TTCAAGTTATCACACAAGGTCAGGGACAAACTAAGACATCAGAAGTTCAATTCCCTACAGGTAAAAAGACTTCATCTGTA
GATATTTACTCTCGTACCTACAAATCTCCAAGTCAAGCAGATGCGCGTGAGGTAGCCAACTATGGTAAAGATGATCCATA
TACAGCTACAGAAAGCAATTATCAATATCCATCAATGATTGCAAGCTCAGCGGTTGCTGGTTTGATCGGTTTGATTATTT
CGTATGCGATTGCGATTCCACTTGGATCTGCCATGGCTCGCCACAAGAATACTTGGATTGATAGCTTCTCGACAGGTGCT
CTTACCTTCTTGCTTGCCCTTCCAACGATTGCCTTGGTTTATATCGTGCGTTTGATTGGCTCATCTATTGGTCTGCCTGA
TTCATTCCCTATCTTGGGGGCTGGAGATTGGCGTTCATATGTCTTGCCAGCAGTCATTCTAGGTTTGTTGGGTGCGCCAA
GTACAGCTATCTGGATTCGTCGTTACATGATCGACTTGCAATCTCAGGACTTCGTTCGTTTTGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAATAAACACATCTTTAAAAATGCCATGGTTCCTTTGGTTTCAGGTATTCCTGGTGCCGTAAT
CGGGGTTATCGGTGGTGCAACATTGACAGAAACAGTCTTCGCTTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTTA
AGGCATCAAATAACTCAATGGTAGTTGGTCTTGTCTTCATCTTCACATGTATTTCTATCTTCTCACTCTTTGTAGGAGAC
ATCTGGATGACCATGCTTGACCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0Q2A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.707

100

0.767
  amiC Streptococcus thermophilus LMG 18311

76.104

100

0.761
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment