Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA   Type   Regulator
Locus tag   FD735_RS00210 Genome accession   NZ_CP040231
Coordinates   34529..36682 (+) Length   717 a.a.
NCBI ID   WP_125414668.1    Uniprot ID   A0A5B7Y4D7
Organism   Streptococcus sp. 1643     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 29529..41682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS00170 (FD735_00170) - 29908..31077 (+) 1170 WP_139658201.1 pyridoxal phosphate-dependent aminotransferase -
  FD735_RS00175 (FD735_00175) recO 31074..31844 (+) 771 WP_000616143.1 DNA repair protein RecO -
  FD735_RS00180 (FD735_00180) plsX 31841..32833 (+) 993 WP_139658202.1 phosphate acyltransferase PlsX -
  FD735_RS00185 (FD735_00185) - 32839..33075 (+) 237 WP_000136435.1 acyl carrier protein -
  FD735_RS00190 (FD735_00190) - 33514..33702 (+) 189 WP_049501355.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  FD735_RS00195 (FD735_00195) - 33720..33887 (+) 168 WP_000415691.1 bacteriocin -
  FD735_RS00200 (FD735_00200) - 33897..34085 (+) 189 WP_139658203.1 hypothetical protein -
  FD735_RS00205 (FD735_00205) - 34110..34319 (+) 210 WP_125414669.1 bacteriocin immunity protein -
  FD735_RS00210 (FD735_00210) comA 34529..36682 (+) 2154 WP_125414668.1 peptide cleavage/export ABC transporter ComA Regulator
  FD735_RS00215 (FD735_00215) comB 36695..38044 (+) 1350 WP_139658204.1 competence pheromone export protein ComB Regulator
  FD735_RS00220 (FD735_00220) purC 38213..38920 (+) 708 WP_139658205.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  FD735_RS09860 - 39000..39065 (+) 66 Protein_37 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence


Protein


Download         Length: 717 a.a.        Molecular weight: 80442.73 Da        Isoelectric Point: 7.1568

>NTDB_id=362610 FD735_RS00210 WP_125414668.1 34529..36682(+) (comA) [Streptococcus sp. 1643]
MKFGKRHYRPQVDQMDCGVASLAMVFGYYGSYYSLAHLRELAKTTMDGTTALGLVKVAEEIGFETRAIKADMTLFDLPDL
TFPFVAHVLKEGKLLHYYVVIGQDKKHIHIADPDPGIKLTKISRERFAQEWTGVSIFMAPSPDYKPHKEKKQGLLSFLPI
LLKQRGLITNIVLATLLVTFINIVGSYYLQSIIDSYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSID
VILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTILIISLVLFSQNMTLFFISLLALPIYTV
IIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESSRYQKIDKEFVAYLKKSFTYSRAESQQKALKKVAQL
LLNVAVLWLGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASEFEEKKTVEDLSMM
KGEMTFKQVHYKYGYGRDVLSDINLTIPQGSKMAFVGISGSGKTTLAKMMVNFYDPSQGEISLGGVNLNQIDKKALRQYI
NYLPQQPYVFNGTILENLLLGAKEGTTQEDILRAVELAEIREDIERMPLNYQTELTSDGAGISGGQRQRIALARALLTDA
PVLILDEATSSLDILTEKRIVDNLMALDKTLIFIAHRLTIAERTEKVVVLNQGRIVEEGTHADLLAQNGFYAHLVNS

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=362610 FD735_RS00210 WP_125414668.1 34529..36682(+) (comA) [Streptococcus sp. 1643]
ATGAAATTTGGGAAAAGGCACTATCGTCCCCAGGTGGATCAGATGGATTGTGGCGTGGCTTCCTTGGCTATGGTCTTTGG
CTACTACGGTAGTTATTACTCCTTGGCTCATCTACGAGAGTTAGCCAAGACGACCATGGATGGGACGACCGCTTTGGGAC
TTGTAAAGGTAGCAGAGGAGATTGGGTTTGAGACGCGGGCTATCAAGGCGGATATGACGCTCTTTGATTTGCCAGATTTG
ACCTTTCCTTTTGTGGCTCATGTGCTCAAGGAAGGGAAGTTGCTCCACTACTATGTGGTGATAGGTCAGGATAAAAAGCA
CATTCATATCGCTGATCCAGATCCTGGTATCAAGCTGACCAAGATTTCCCGTGAGCGATTTGCGCAAGAGTGGACAGGGG
TTAGTATTTTTATGGCACCATCACCGGACTACAAACCTCATAAGGAGAAAAAACAGGGGCTCCTATCCTTCTTGCCAATC
TTACTCAAACAGCGTGGCTTGATTACCAATATCGTCCTAGCGACACTCTTGGTGACCTTTATCAATATCGTGGGTTCCTA
CTATCTTCAGTCCATCATTGATAGTTACGTACCAGACCAGATGCGTTCGACGCTGGGTATCATCTCAATAGGACTAGTCA
TCGTCTATATTCTCCAGCAGATTTTGTCCTATGCGCAGGAATACCTTTTACTTGTTCTGGGACAACGGTTGTCCATCGAT
GTGATTTTGTCCTACATCAAGCATGTTTTTCACCTGCCGATGTCCTTTTTTGCGACACGGAGGACAGGAGAAATCGTGTC
TCGTTTTACAGATGCCAACAGTATTATCGATGCGCTGGCGTCGACCATTCTGTCGATTTTCCTAGATGTGTCAACGATTT
TGATTATCTCGCTTGTCTTGTTTTCACAAAATATGACACTCTTTTTCATTAGTCTGCTTGCGCTTCCCATCTATACAGTG
ATTATCTTTGCTTTTATGAAGCCTTTTGAAAAGATGAATCGGGATACCATGGAAGCCAATGCAGTTCTGTCTTCCTCTAT
CATCGAGGACATCAACGGTATTGAGACTATCAAGTCTTTGACCAGTGAGAGTTCGCGCTATCAAAAGATTGATAAGGAAT
TTGTGGCTTATCTGAAAAAATCTTTTACCTATAGTCGGGCAGAAAGCCAGCAAAAGGCTCTGAAAAAAGTTGCCCAGCTC
CTGCTCAATGTTGCCGTTCTCTGGCTGGGAGCAGTTCTTGTCATGGATGGGAAAATGAGTTTGGGCCAGCTGATTACCTA
TAATACCTTGCTTGTTTACTTTACCAATCCTTTGGAAAATATCATCAACCTGCAAACCAAACTTCAGACAGCGCAGGTCG
CCAATAACCGTCTAAACGAAGTGTATCTAGTAGCTTCGGAGTTTGAGGAGAAGAAAACGGTAGAAGATCTGAGCATGATG
AAGGGAGAGATGACCTTCAAGCAGGTTCACTATAAGTATGGCTATGGTCGTGACGTCTTGTCGGATATCAATTTGACCAT
TCCGCAAGGGTCTAAGATGGCTTTTGTGGGGATTTCGGGGTCAGGAAAGACCACCTTGGCAAAGATGATGGTTAATTTTT
ACGATCCAAGTCAGGGAGAGATTAGTCTAGGTGGTGTCAATCTCAATCAGATTGATAAAAAGGCCCTGCGCCAGTATATC
AACTATCTACCTCAACAGCCCTATGTCTTTAACGGAACGATTTTGGAGAATCTTCTCCTTGGAGCCAAGGAGGGGACGAC
TCAGGAAGATATCTTACGAGCAGTCGAGTTGGCAGAGATTCGGGAGGATATTGAGCGCATGCCACTGAATTACCAGACAG
AATTAACTTCGGATGGGGCTGGAATTTCTGGTGGGCAACGGCAGAGAATCGCTCTGGCGCGTGCTCTCTTGACGGATGCG
CCGGTCTTGATTTTGGATGAGGCAACTAGTAGTTTGGATATTTTGACAGAGAAGCGGATCGTGGATAATCTTATGGCTTT
GGACAAGACCTTGATTTTCATCGCCCACCGCTTGACCATCGCTGAGCGGACAGAGAAGGTTGTTGTTTTGAATCAGGGCA
GGATTGTCGAAGAAGGTACCCATGCAGACTTGCTTGCACAGAATGGCTTTTATGCCCATTTGGTCAATAGCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5B7Y4D7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

94.84

100

0.948

  comA Streptococcus mitis NCTC 12261

94.7

100

0.947

  comA Streptococcus pneumoniae Rx1

94.561

100

0.946

  comA Streptococcus pneumoniae D39

94.561

100

0.946

  comA Streptococcus pneumoniae R6

94.561

100

0.946

  comA Streptococcus pneumoniae TIGR4

94.142

100

0.941

  comA Streptococcus gordonii str. Challis substr. CH1

80.335

100

0.803

  comA/nlmT Streptococcus mutans UA159

64.156

100

0.642


Multiple sequence alignment