Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GPZ77_RS11520 | Genome accession | NZ_CP046905 |
| Coordinates | 2525876..2526547 (-) | Length | 223 a.a. |
| NCBI ID | WP_158987288.1 | Uniprot ID | - |
| Organism | Streptomyces sp. QHH-9511 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2520876..2531547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - | clpP | 2525876..2526547 (-) | 672 | - | - | Regulator |
Sequence
Protein
Download Length: 223 a.a. Molecular weight: 24256.63 Da Isoelectric Point: 4.5861
>NTDB_id=356641 GPZ77_RS11520 WP_158987288.1 2525876..2526547(-) (clpP) [Streptomyces sp. QHH-9511]
MNAMPPTFSASGLYTGPQVDNRYVVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRD
ISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSGGTGREQLSDLEI
AANEILRMRTQLEEMLAKHSSTPIEKIRDDIERDKILTAEDALAYGLVDQIVSTRKSTAAAAA
MNAMPPTFSASGLYTGPQVDNRYVVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRD
ISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSGGTGREQLSDLEI
AANEILRMRTQLEEMLAKHSSTPIEKIRDDIERDKILTAEDALAYGLVDQIVSTRKSTAAAAA
Nucleotide
Download Length: 672 bp
>NTDB_id=356641 GPZ77_RS11520 WP_158987288.1 2525876..2526547(-) (clpP) [Streptomyces sp. QHH-9511]
ATGAACGCGATGCCCCCGACCTTCTCCGCGAGCGGCCTCTACACCGGCCCCCAGGTGGACAACCGGTACGTCGTCCCGCG
CTTCGTCGAGCGCACCTCGCAGGGCGTGCGCGAGTACGACCCGTACGCCAAGCTCTTCGAGGAGCGCGTGATCTTCCTCG
GCGTGCAGATCGACGACGCCTCCGCCAACGACGTCATGGCCCAGCTGCTGTGCCTGGAGTCGATGGACCCTGACCGCGAC
ATCTCGATCTACATCAACAGCCCCGGTGGCTCCTTCACCGCGCTGACCGCCATCTACGACACCATGCAGTTCGTGAAGCC
GGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCGGCCGTGCTGCTCGCCGCGGGTACGCCCGGCAAGCGGA
TGGCCCTGCCGAACGCCCGCGTGCTGATCCACCAGCCCTCGGGCGGCACCGGCCGTGAGCAGCTCTCCGACCTGGAGATC
GCGGCCAACGAGATCCTGCGGATGCGCACCCAGCTGGAAGAGATGCTGGCCAAGCACTCCTCGACGCCGATCGAGAAGAT
CCGCGACGACATCGAGCGCGACAAGATCCTGACCGCCGAGGACGCCCTGGCGTACGGTCTCGTCGACCAGATCGTCTCGA
CCCGCAAGAGCACGGCCGCCGCGGCAGCCTGA
ATGAACGCGATGCCCCCGACCTTCTCCGCGAGCGGCCTCTACACCGGCCCCCAGGTGGACAACCGGTACGTCGTCCCGCG
CTTCGTCGAGCGCACCTCGCAGGGCGTGCGCGAGTACGACCCGTACGCCAAGCTCTTCGAGGAGCGCGTGATCTTCCTCG
GCGTGCAGATCGACGACGCCTCCGCCAACGACGTCATGGCCCAGCTGCTGTGCCTGGAGTCGATGGACCCTGACCGCGAC
ATCTCGATCTACATCAACAGCCCCGGTGGCTCCTTCACCGCGCTGACCGCCATCTACGACACCATGCAGTTCGTGAAGCC
GGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCGGCCGTGCTGCTCGCCGCGGGTACGCCCGGCAAGCGGA
TGGCCCTGCCGAACGCCCGCGTGCTGATCCACCAGCCCTCGGGCGGCACCGGCCGTGAGCAGCTCTCCGACCTGGAGATC
GCGGCCAACGAGATCCTGCGGATGCGCACCCAGCTGGAAGAGATGCTGGCCAAGCACTCCTCGACGCCGATCGAGAAGAT
CCGCGACGACATCGAGCGCGACAAGATCCTGACCGCCGAGGACGCCCTGGCGTACGGTCTCGTCGACCAGATCGTCTCGA
CCCGCAAGAGCACGGCCGCCGCGGCAGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
51.579 |
85.202 |
0.439 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
49.468 |
84.305 |
0.417 |
| clpP | Streptococcus thermophilus LMD-9 |
45.361 |
86.996 |
0.395 |
| clpP | Streptococcus pyogenes JRS4 |
45.361 |
86.996 |
0.395 |
| clpP | Streptococcus pyogenes MGAS315 |
45.361 |
86.996 |
0.395 |
| clpP | Streptococcus thermophilus LMG 18311 |
45.361 |
86.996 |
0.395 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
45.55 |
85.65 |
0.39 |
| clpP | Streptococcus mutans UA159 |
44.845 |
86.996 |
0.39 |
| clpP | Streptococcus pneumoniae R6 |
44.56 |
86.547 |
0.386 |
| clpP | Streptococcus pneumoniae TIGR4 |
44.56 |
86.547 |
0.386 |
| clpP | Streptococcus pneumoniae D39 |
44.56 |
86.547 |
0.386 |
| clpP | Streptococcus pneumoniae Rx1 |
44.56 |
86.547 |
0.386 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.503 |
85.65 |
0.381 |