Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GPZ77_RS04815 | Genome accession | NZ_CP046905 |
| Coordinates | 1079030..1079650 (+) | Length | 206 a.a. |
| NCBI ID | WP_158985075.1 | Uniprot ID | - |
| Organism | Streptomyces sp. QHH-9511 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1074030..1084650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - | clpP | 1079030..1079650 (+) | 621 | - | - | Regulator |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 21921.93 Da Isoelectric Point: 4.8317
>NTDB_id=356625 GPZ77_RS04815 WP_158985075.1 1079030..1079650(+) (clpP) [Streptomyces sp. QHH-9511]
MHARYVLPEFTERTSFGSRTLDPYSKLLEERIVFLGTPVDETSANDVIAQFLHLEYAAPDRDISLYINSPGGSLSAMSAI
YDTMQVVTCDVETICLGQAASTAAVLLAAGAPGKRLALPGARVVLQQPSMGEPLQGQPSDLDIQARELLRLRAMVAGMLA
THTGRSPERVDADFDRATVLDAPAAVAYGLVDHVIQNRGAVGGGGR
MHARYVLPEFTERTSFGSRTLDPYSKLLEERIVFLGTPVDETSANDVIAQFLHLEYAAPDRDISLYINSPGGSLSAMSAI
YDTMQVVTCDVETICLGQAASTAAVLLAAGAPGKRLALPGARVVLQQPSMGEPLQGQPSDLDIQARELLRLRAMVAGMLA
THTGRSPERVDADFDRATVLDAPAAVAYGLVDHVIQNRGAVGGGGR
Nucleotide
Download Length: 621 bp
>NTDB_id=356625 GPZ77_RS04815 WP_158985075.1 1079030..1079650(+) (clpP) [Streptomyces sp. QHH-9511]
ATGCACGCCCGCTACGTCCTGCCCGAGTTCACCGAGCGCACCAGTTTCGGCAGCCGGACCCTCGACCCCTACTCGAAGCT
GCTCGAGGAGCGGATCGTCTTCCTCGGGACCCCCGTCGACGAGACCTCGGCCAACGACGTCATCGCCCAGTTCCTCCACC
TGGAGTACGCCGCCCCGGACCGGGACATCTCGCTCTACATCAACTCCCCCGGCGGTTCGCTCAGCGCCATGTCCGCGATC
TACGACACGATGCAGGTCGTCACCTGCGACGTGGAGACCATCTGCCTGGGCCAGGCGGCCTCCACCGCCGCCGTCCTGCT
CGCGGCCGGAGCGCCCGGCAAGCGGCTCGCGCTGCCCGGCGCCCGCGTGGTGCTCCAGCAGCCCTCGATGGGCGAGCCGT
TGCAGGGACAGCCGAGCGATCTCGACATCCAGGCGCGAGAACTGCTGCGGCTGCGCGCGATGGTGGCCGGCATGCTCGCC
ACCCACACCGGCCGGAGCCCCGAGCGGGTCGACGCCGACTTCGACCGGGCCACCGTCCTCGACGCCCCGGCCGCCGTCGC
CTACGGCCTGGTCGACCACGTGATCCAGAACCGCGGGGCGGTCGGCGGCGGGGGCCGGTGA
ATGCACGCCCGCTACGTCCTGCCCGAGTTCACCGAGCGCACCAGTTTCGGCAGCCGGACCCTCGACCCCTACTCGAAGCT
GCTCGAGGAGCGGATCGTCTTCCTCGGGACCCCCGTCGACGAGACCTCGGCCAACGACGTCATCGCCCAGTTCCTCCACC
TGGAGTACGCCGCCCCGGACCGGGACATCTCGCTCTACATCAACTCCCCCGGCGGTTCGCTCAGCGCCATGTCCGCGATC
TACGACACGATGCAGGTCGTCACCTGCGACGTGGAGACCATCTGCCTGGGCCAGGCGGCCTCCACCGCCGCCGTCCTGCT
CGCGGCCGGAGCGCCCGGCAAGCGGCTCGCGCTGCCCGGCGCCCGCGTGGTGCTCCAGCAGCCCTCGATGGGCGAGCCGT
TGCAGGGACAGCCGAGCGATCTCGACATCCAGGCGCGAGAACTGCTGCGGCTGCGCGCGATGGTGGCCGGCATGCTCGCC
ACCCACACCGGCCGGAGCCCCGAGCGGGTCGACGCCGACTTCGACCGGGCCACCGTCCTCGACGCCCCGGCCGCCGTCGC
CTACGGCCTGGTCGACCACGTGATCCAGAACCGCGGGGCGGTCGGCGGCGGGGGCCGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
45.263 |
92.233 |
0.417 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
42.932 |
92.718 |
0.398 |
| clpP | Streptococcus pneumoniae R6 |
41.969 |
93.689 |
0.393 |
| clpP | Streptococcus pneumoniae Rx1 |
41.969 |
93.689 |
0.393 |
| clpP | Streptococcus pneumoniae D39 |
41.969 |
93.689 |
0.393 |
| clpP | Streptococcus pneumoniae TIGR4 |
41.969 |
93.689 |
0.393 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
41.026 |
94.66 |
0.388 |
| clpP | Streptococcus mutans UA159 |
40.415 |
93.689 |
0.379 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
39.691 |
94.175 |
0.374 |
| clpP | Streptococcus pyogenes JRS4 |
39.896 |
93.689 |
0.374 |
| clpP | Streptococcus pyogenes MGAS315 |
39.896 |
93.689 |
0.374 |
| clpP | Streptococcus thermophilus LMG 18311 |
38.86 |
93.689 |
0.364 |
| clpP | Streptococcus thermophilus LMD-9 |
38.86 |
93.689 |
0.364 |