Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | HNEAP_RS00075 | Genome accession | NC_013422 |
| Coordinates | 16642..17178 (-) | Length | 178 a.a. |
| NCBI ID | WP_012822917.1 | Uniprot ID | D0KVV3 |
| Organism | Halothiobacillus neapolitanus c2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 11642..22178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HNEAP_RS00055 (Hneap_0009) | - | 12156..12896 (-) | 741 | WP_049772428.1 | ABC transporter ATP-binding protein | - |
| HNEAP_RS00060 (Hneap_0010) | - | 13062..13742 (+) | 681 | WP_243726344.1 | arylesterase | - |
| HNEAP_RS00065 (Hneap_0011) | - | 14129..14500 (-) | 372 | WP_012822914.1 | endonuclease domain-containing protein | - |
| HNEAP_RS00070 (Hneap_0012) | - | 14569..15519 (-) | 951 | WP_012822915.1 | IS110 family transposase | - |
| HNEAP_RS00075 (Hneap_0014) | pilE | 16642..17178 (-) | 537 | WP_012822917.1 | pilin | Machinery gene |
| HNEAP_RS00080 (Hneap_0015) | - | 17753..18331 (+) | 579 | WP_012822918.1 | GspH/FimT family pseudopilin | - |
| HNEAP_RS00085 (Hneap_0016) | pilV | 18315..18794 (+) | 480 | WP_012822919.1 | type IV pilus modification protein PilV | - |
| HNEAP_RS00090 (Hneap_0017) | - | 18791..19822 (+) | 1032 | WP_012822920.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| HNEAP_RS12765 (Hneap_0018) | - | 20089..20643 (+) | 555 | WP_041600468.1 | pilus assembly PilX family protein | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 17948.56 Da Isoelectric Point: 5.7580
>NTDB_id=35519 HNEAP_RS00075 WP_012822917.1 16642..17178(-) (pilE) [Halothiobacillus neapolitanus c2]
MLKQMNKSVNKGFTLIELMIVIAIIGILAAIAIPAYQDYTVRAKVTELISVADAAKTGVAEAWTSDGLTGVTNFATSFNA
EPATAHQSKYVSAIAIDPNTGAITVTSSTAAGSGLPTDAQGMTIVLQPNVQNAALVAGATGAIDWACASTSAATAGSNGL
AGITLGTMPAKYVPSQCK
MLKQMNKSVNKGFTLIELMIVIAIIGILAAIAIPAYQDYTVRAKVTELISVADAAKTGVAEAWTSDGLTGVTNFATSFNA
EPATAHQSKYVSAIAIDPNTGAITVTSSTAAGSGLPTDAQGMTIVLQPNVQNAALVAGATGAIDWACASTSAATAGSNGL
AGITLGTMPAKYVPSQCK
Nucleotide
Download Length: 537 bp
>NTDB_id=35519 HNEAP_RS00075 WP_012822917.1 16642..17178(-) (pilE) [Halothiobacillus neapolitanus c2]
ATGCTCAAGCAAATGAACAAGTCTGTGAATAAGGGTTTCACCCTGATCGAATTGATGATCGTCATCGCGATTATCGGTAT
TCTGGCCGCCATCGCGATTCCTGCTTATCAGGATTACACCGTTCGTGCCAAAGTCACTGAATTGATTAGCGTCGCTGATG
CTGCGAAAACAGGCGTGGCCGAAGCGTGGACATCCGATGGGTTGACCGGGGTAACCAACTTCGCCACTTCATTCAATGCA
GAACCCGCAACGGCTCATCAATCTAAGTATGTTTCTGCCATTGCAATTGACCCGAATACCGGTGCAATTACTGTAACTTC
AAGCACCGCTGCAGGTTCAGGTTTGCCAACCGATGCTCAAGGGATGACCATTGTGCTGCAACCCAACGTCCAAAATGCTG
CATTGGTTGCAGGTGCGACCGGCGCGATTGACTGGGCTTGTGCCTCAACTTCAGCAGCAACTGCCGGTTCAAATGGCCTT
GCCGGTATTACACTTGGCACCATGCCAGCTAAGTATGTACCTAGCCAGTGCAAATAA
ATGCTCAAGCAAATGAACAAGTCTGTGAATAAGGGTTTCACCCTGATCGAATTGATGATCGTCATCGCGATTATCGGTAT
TCTGGCCGCCATCGCGATTCCTGCTTATCAGGATTACACCGTTCGTGCCAAAGTCACTGAATTGATTAGCGTCGCTGATG
CTGCGAAAACAGGCGTGGCCGAAGCGTGGACATCCGATGGGTTGACCGGGGTAACCAACTTCGCCACTTCATTCAATGCA
GAACCCGCAACGGCTCATCAATCTAAGTATGTTTCTGCCATTGCAATTGACCCGAATACCGGTGCAATTACTGTAACTTC
AAGCACCGCTGCAGGTTCAGGTTTGCCAACCGATGCTCAAGGGATGACCATTGTGCTGCAACCCAACGTCCAAAATGCTG
CATTGGTTGCAGGTGCGACCGGCGCGATTGACTGGGCTTGTGCCTCAACTTCAGCAGCAACTGCCGGTTCAAATGGCCTT
GCCGGTATTACACTTGGCACCATGCCAGCTAAGTATGTACCTAGCCAGTGCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
49.198 |
100 |
0.517 |
| pilA2 | Legionella pneumophila str. Paris |
45.198 |
99.438 |
0.449 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.633 |
99.438 |
0.444 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
42.857 |
100 |
0.438 |
| comP | Acinetobacter baylyi ADP1 |
39.429 |
98.315 |
0.388 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.813 |
100 |
0.376 |